Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611973
Identifier: 120611973
GI number: 120611973
Start: 3667031
End: 3667378
Strand: Direct
Name: 120611973
Synonym: Aave_3317
Alternate gene names: NA
Gene position: 3667031-3667378 (Clockwise)
Preceding gene: 120611972
Following gene: 120611977
Centisome position: 68.51
GC content: 71.26
Gene sequence:
>348_bases GTGGCGTGCGCAGCGGCACCGCTGCTGCTGTCGGCCTGCGACATTCCCGGGCTGGGGCCCGATCCACGCACAGTGCAGAA GGAAGCCGAGGCCAAGGCGATCGGCGGCGCCTGCCGCCACGCGCTGCGGGGACTGGAGGACTGCTTCACCCTCAACCCCA AGGCCTCGAAGGCCCAGGTGTTCGCGGGCTGGAAGGAAATGGACCAGTACATGCGCGAGAACAAGCTGGAGGGCGCGCCC TCGGTGCTGGGCAACCTGGAGAAGCCCCCGACCACCCCGGCCCGTCGCGCAGAGGAAGGCCGCGCGGAGGAAACCCGCGA AGGCGGGTCGGGCCGCAGCCGGAGCTGA
Upstream 100 bases:
>100_bases GCGCAGCGGCCGATAATGACTGGAACATGCCACACCGCCACACCGCCACACAGCCCCCTCCTCCGCCCGCCGCCCGCCCG GCCGCCGGCTTTCCTGGCTC
Downstream 100 bases:
>100_bases AGCCGCATTCGCACTGCAGGCCCGCCGGCCGGCCCGGCCAACCCTTCAAGGCCTGCCGTTGGGCCACTCAAGCAGCAGCA CCCGGTTCCGGGAACGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MACAAAPLLLSACDIPGLGPDPRTVQKEAEAKAIGGACRHALRGLEDCFTLNPKASKAQVFAGWKEMDQYMRENKLEGAP SVLGNLEKPPTTPARRAEEGRAEETREGGSGRSRS
Sequences:
>Translated_115_residues MACAAAPLLLSACDIPGLGPDPRTVQKEAEAKAIGGACRHALRGLEDCFTLNPKASKAQVFAGWKEMDQYMRENKLEGAP SVLGNLEKPPTTPARRAEEGRAEETREGGSGRSRS >Mature_114_residues ACAAAPLLLSACDIPGLGPDPRTVQKEAEAKAIGGACRHALRGLEDCFTLNPKASKAQVFAGWKEMDQYMRENKLEGAPS VLGNLEKPPTTPARRAEEGRAEETREGGSGRSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12251; Mature: 12120
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACAAAPLLLSACDIPGLGPDPRTVQKEAEAKAIGGACRHALRGLEDCFTLNPKASKAQV CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FAGWKEMDQYMRENKLEGAPSVLGNLEKPPTTPARRAEEGRAEETREGGSGRSRS HHCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCC >Mature Secondary Structure ACAAAPLLLSACDIPGLGPDPRTVQKEAEAKAIGGACRHALRGLEDCFTLNPKASKAQV CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FAGWKEMDQYMRENKLEGAPSVLGNLEKPPTTPARRAEEGRAEETREGGSGRSRS HHCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA