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The map label for this gene is yccA [C]

Identifier: 120611972

GI number: 120611972

Start: 3666127

End: 3666819

Strand: Direct

Name: yccA [C]

Synonym: Aave_3316

Alternate gene names: 120611972

Gene position: 3666127-3666819 (Clockwise)

Preceding gene: 120611970

Following gene: 120611973

Centisome position: 68.49

GC content: 65.37

Gene sequence:

>693_bases
ATGAATGATCAAGTCACCGTTCTGGGCTCTGCGGGCTACGGCGTATCGCAGGAGCAGCGGCAGCGTGTGCTGCGCAATAC
CTACTGGCTGCTCGCACTGAGCATGGTGCCCACGGTGCTGGGCGCCTGGCTGGGCGTGGCCACCGGCATCACGCAGTCCC
TGCGGGGCGGCGTGGGCCTGATCGTCTTCCTGGGCGGCGCCTTCGGCTTCATGTTCGCCATCGAGAAGACCAAGAACTCG
GCGGCCGGCGTGCCGGTGCTGCTGGGCTTCACGTTCTTCATGGGCCTCATGCTCTCGCGCCTGATCGGCATGGTGCTGGG
CTTCAAGAACGGCACCGACCTCGTCATGACGGCCTTCGCCGGCACGGCGGGCGTGTTCCTGGTCATGGCCAGCCTCGCCA
CCGTGATCAAGCGCGACCTCTCCGGCATGGGCAAGTGGCTCTTCGTGGGCGCCATGGTCCTGCTGGTGGGCTCGGTCATC
AACGTGTTCGTGGGATCCTCGGCCGGCATGATGGCCATCTCGGTGGCGGCCATCGGCATCTTCAGCGCCTACATGCTGTA
CGACCTGAAGCAGATCATCGACGGCGGCGAGACCAACTACATCAGCGCCACGCTGGCGCTGTACCTGGACGTCTTCAACG
TGTTCCAGAGCCTGCTGGCCCTGCTCGGCATCATGGGCGGCGAGCGCGACTGA

Upstream 100 bases:

>100_bases
GGGAGTGGCAAAGGTTATTTGAAAGCGGGCTGGAAGCCACCACCTAGAATTTGCCGGTCTGCACTTCGCAGGCCTCAACA
GGCAAAGGGAGCAAGAGAAG

Downstream 100 bases:

>100_bases
CGCCCCGGCACGCACCGGAGGGCCCCGGGCCCTCCAGCAGCAGGAAGGCCTCCCCCGCGGAGGCCTTTTTGCTTTTCCTC
AGGATGGGCGCACGCAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNDQVTVLGSAGYGVSQEQRQRVLRNTYWLLALSMVPTVLGAWLGVATGITQSLRGGVGLIVFLGGAFGFMFAIEKTKNS
AAGVPVLLGFTFFMGLMLSRLIGMVLGFKNGTDLVMTAFAGTAGVFLVMASLATVIKRDLSGMGKWLFVGAMVLLVGSVI
NVFVGSSAGMMAISVAAIGIFSAYMLYDLKQIIDGGETNYISATLALYLDVFNVFQSLLALLGIMGGERD

Sequences:

>Translated_230_residues
MNDQVTVLGSAGYGVSQEQRQRVLRNTYWLLALSMVPTVLGAWLGVATGITQSLRGGVGLIVFLGGAFGFMFAIEKTKNS
AAGVPVLLGFTFFMGLMLSRLIGMVLGFKNGTDLVMTAFAGTAGVFLVMASLATVIKRDLSGMGKWLFVGAMVLLVGSVI
NVFVGSSAGMMAISVAAIGIFSAYMLYDLKQIIDGGETNYISATLALYLDVFNVFQSLLALLGIMGGERD
>Mature_230_residues
MNDQVTVLGSAGYGVSQEQRQRVLRNTYWLLALSMVPTVLGAWLGVATGITQSLRGGVGLIVFLGGAFGFMFAIEKTKNS
AAGVPVLLGFTFFMGLMLSRLIGMVLGFKNGTDLVMTAFAGTAGVFLVMASLATVIKRDLSGMGKWLFVGAMVLLVGSVI
NVFVGSSAGMMAISVAAIGIFSAYMLYDLKQIIDGGETNYISATLALYLDVFNVFQSLLALLGIMGGERD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=224, Percent_Identity=36.1607142857143, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24255; Mature: 24255

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQVTVLGSAGYGVSQEQRQRVLRNTYWLLALSMVPTVLGAWLGVATGITQSLRGGVGL
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IVFLGGAFGFMFAIEKTKNSAAGVPVLLGFTFFMGLMLSRLIGMVLGFKNGTDLVMTAFA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GTAGVFLVMASLATVIKRDLSGMGKWLFVGAMVLLVGSVINVFVGSSAGMMAISVAAIGI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
FSAYMLYDLKQIIDGGETNYISATLALYLDVFNVFQSLLALLGIMGGERD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDQVTVLGSAGYGVSQEQRQRVLRNTYWLLALSMVPTVLGAWLGVATGITQSLRGGVGL
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IVFLGGAFGFMFAIEKTKNSAAGVPVLLGFTFFMGLMLSRLIGMVLGFKNGTDLVMTAFA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GTAGVFLVMASLATVIKRDLSGMGKWLFVGAMVLLVGSVINVFVGSSAGMMAISVAAIGI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
FSAYMLYDLKQIIDGGETNYISATLALYLDVFNVFQSLLALLGIMGGERD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]