Click here to switch to the map view.

The map label for this gene is ybeB [H]

Identifier: 120611858

GI number: 120611858

Start: 3528345

End: 3529136

Strand: Reverse

Name: ybeB [H]

Synonym: Aave_3200

Alternate gene names: 120611858

Gene position: 3529136-3528345 (Counterclockwise)

Preceding gene: 120611859

Following gene: 120611857

Centisome position: 65.93

GC content: 72.35

Gene sequence:

>792_bases
ATGACCACCTCCACCCGTTCGGAATCCGCCGCCAAGAAGGACGTCACGAAACTCCAGCGCGCCATCGTCGATGGCCTGGA
GGACGTCAAGGCGCAAGACATCCAGGTGTTCAACACCGAGAAGCTGTCGCCGCTCTTCGAGCGGGTCATCGTGGCGTCGG
GCACGTCCAACCGGCAGACCAAGGCCCTGGCCGCCAGCGTGCGCGACGCCGTGCGCGAGGCGGGCTTCCCCAAGCCGCGC
ACCGAGGGCGAGGACAACGGCGAATGGATCATCGTGGACTGCGGCGCCGCCGTGGCCCACATCATGCAGCCGGCCATCCG
CCAGTACTACCGCCTGGAAGAGATCTGGGGCGAGACGCCGGTGCGCCTGAAGCTCGGTGCCGCCAAGCCCGTGAAGGCCG
CCGAATCCGGCGATGCCGCGCCCGCGAAGAAGAAAGCCGCGCCGCGCAAGAAGGCCGCGGCGGCCGAAGCGGAAGTGCCG
GCACGCAAGCCGGGCCGCGGCAAGGCCACCGCCGCTGCCCCCGCTCCGGCTCCCGCCAGGAAGGCTGCCGGCAAGGCCGC
GCCCGCGAAGGCCGCTGCCGCCAAGGCTCCGGCCAAGGCCCCCGCCAGGGCGCCTGCGAAAGCCGCCGCCGGCAAGTCGC
CCGCAGCCAAGTCCGCGGCACCGAAGGTGAAGACCGTGGTCGTGAAGCCCGTGGCCCGCAAGCCCGCCGCGAAGTCCGCT
GCCGCGAAGGCGCCGGCGGCTCCGCGCAAGGCTGCCGCCAGGAAGGCCCCGTCCCGCAAGAAGGCCGGCTGA

Upstream 100 bases:

>100_bases
ACCCCGCTGCGCTGGCGCATCGCGTGCCCGCAGCGCTCCATTGGCTCCCGCGCGTGTTGCGCGCTATATTGCCTCTCACC
CCCAACACTTCCCGTCCCTG

Downstream 100 bases:

>100_bases
GTGAGCAGGCAGGCGGGCATGCCGCCCGCGGAGCATTGACCGATGAAGCTGCTCATCGTGGCCGTGGGCCAGCGCGTGCC
CGACTGGGCGCAGACCGCCT

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTTSTRSESAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEKLSPLFERVIVASGTSNRQTKALAASVRDAVREAGFPKPR
TEGEDNGEWIIVDCGAAVAHIMQPAIRQYYRLEEIWGETPVRLKLGAAKPVKAAESGDAAPAKKKAAPRKKAAAAEAEVP
ARKPGRGKATAAAPAPAPARKAAGKAAPAKAAAAKAPAKAPARAPAKAAAGKSPAAKSAAPKVKTVVVKPVARKPAAKSA
AAKAPAAPRKAAARKAPSRKKAG

Sequences:

>Translated_263_residues
MTTSTRSESAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEKLSPLFERVIVASGTSNRQTKALAASVRDAVREAGFPKPR
TEGEDNGEWIIVDCGAAVAHIMQPAIRQYYRLEEIWGETPVRLKLGAAKPVKAAESGDAAPAKKKAAPRKKAAAAEAEVP
ARKPGRGKATAAAPAPAPARKAAGKAAPAKAAAAKAPAKAPARAPAKAAAGKSPAAKSAAPKVKTVVVKPVARKPAAKSA
AAKAPAAPRKAAARKAPSRKKAG
>Mature_262_residues
TTSTRSESAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEKLSPLFERVIVASGTSNRQTKALAASVRDAVREAGFPKPRT
EGEDNGEWIIVDCGAAVAHIMQPAIRQYYRLEEIWGETPVRLKLGAAKPVKAAESGDAAPAKKKAAPRKKAAAAEAEVPA
RKPGRGKATAAAPAPAPARKAAGKAAPAKAAAAKAPAKAPARAPAKAAAGKSPAAKSAAPKVKTVVVKPVARKPAAKSAA
AKAPAAPRKAAARKAPSRKKAG

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=99, Percent_Identity=35.3535353535354, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 26953; Mature: 26822

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTRSESAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEKLSPLFERVIVASGTSNRQT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCCCHHH
KALAASVRDAVREAGFPKPRTEGEDNGEWIIVDCGAAVAHIMQPAIRQYYRLEEIWGETP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
VRLKLGAAKPVKAAESGDAAPAKKKAAPRKKAAAAEAEVPARKPGRGKATAAAPAPAPAR
EEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
KAAGKAAPAKAAAAKAPAKAPARAPAKAAAGKSPAAKSAAPKVKTVVVKPVARKPAAKSA
HHCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCHHCCCCCEEEEEECCHHCCCCHHHH
AAKAPAAPRKAAARKAPSRKKAG
HHCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTSTRSESAAKKDVTKLQRAIVDGLEDVKAQDIQVFNTEKLSPLFERVIVASGTSNRQT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCCCHHH
KALAASVRDAVREAGFPKPRTEGEDNGEWIIVDCGAAVAHIMQPAIRQYYRLEEIWGETP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
VRLKLGAAKPVKAAESGDAAPAKKKAAPRKKAAAAEAEVPARKPGRGKATAAAPAPAPAR
EEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
KAAGKAAPAKAAAAKAPAKAPARAPAKAAAGKSPAAKSAAPKVKTVVVKPVARKPAAKSA
HHCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCHHCCCCCEEEEEECCHHCCCCHHHH
AAKAPAAPRKAAARKAPSRKKAG
HHCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]