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The map label for this gene is yhbY [C]

Identifier: 120611283

GI number: 120611283

Start: 2865639

End: 2866115

Strand: Reverse

Name: yhbY [C]

Synonym: Aave_2615

Alternate gene names: 120611283

Gene position: 2866115-2865639 (Counterclockwise)

Preceding gene: 120611288

Following gene: 120611282

Centisome position: 53.54

GC content: 66.88

Gene sequence:

>477_bases
ATGCCCCAAATCCAATTGACCCCCGCGGAGCGCCGGGAACACCGCGCCAACGCCCACCACCTGGACCCCGTGGTGATGAT
CGGCGGCGACGGCCTCACCGCAGCGGTCCAGAAAGAGGTCGATGCCGCGCTGTCGGCCCACGGCCTCATCAAGGTGCGCA
TTCTCGGCGACGACCGGGCCGCGCGCGAGCAGATCTACCAGCAACTGGCCGACGAACTGAATGCCGCGCCGATCCAGCAC
ATCGGCAAGCTCATCGTGCTCTGGCGCCCTCCGGTGAAGAAGGACAAGGCGATCGACGAAGACCGCATGCCCGGCCCGCG
CGACGTGAAGGTCCTCAAGTTCAGCAAGCGCGGCGGCCAGCGGCCGGAAGTGAAGCAGTTGCGCGTGCTCGGCAACCAGC
GCCTGACGCCCGGCGGCCAGATCAAGCGCGCCAAGAAACCGAAGCAGACTTCCGTGAAGAAGCGGCAGGCGGATTGA

Upstream 100 bases:

>100_bases
CGAGCTTGACGTAGGTGTCGTTGACGTGGTCGTGGAGCCACGCCTTGTTCACCTTCTTGCTTTTCGTGTTGGCTTTCATC
CTGCCTCGATAATACGGCCC

Downstream 100 bases:

>100_bases
TGCAGGGGAACTGACGCGATGGGCACGGACATCGGCGCCGCCCGGGCGCAGGGGCCGGCGCATGCCCCCGGGCGCCACAT
CCTCTGCATGAAGTGGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPQIQLTPAERREHRANAHHLDPVVMIGGDGLTAAVQKEVDAALSAHGLIKVRILGDDRAAREQIYQQLADELNAAPIQH
IGKLIVLWRPPVKKDKAIDEDRMPGPRDVKVLKFSKRGGQRPEVKQLRVLGNQRLTPGGQIKRAKKPKQTSVKKRQAD

Sequences:

>Translated_158_residues
MPQIQLTPAERREHRANAHHLDPVVMIGGDGLTAAVQKEVDAALSAHGLIKVRILGDDRAAREQIYQQLADELNAAPIQH
IGKLIVLWRPPVKKDKAIDEDRMPGPRDVKVLKFSKRGGQRPEVKQLRVLGNQRLTPGGQIKRAKKPKQTSVKKRQAD
>Mature_157_residues
PQIQLTPAERREHRANAHHLDPVVMIGGDGLTAAVQKEVDAALSAHGLIKVRILGDDRAAREQIYQQLADELNAAPIQHI
GKLIVLWRPPVKKDKAIDEDRMPGPRDVKVLKFSKRGGQRPEVKQLRVLGNQRLTPGGQIKRAKKPKQTSVKKRQAD

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=87, Percent_Identity=39.0804597701149, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 17627; Mature: 17496

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIQLTPAERREHRANAHHLDPVVMIGGDGLTAAVQKEVDAALSAHGLIKVRILGDDRA
CCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHH
AREQIYQQLADELNAAPIQHIGKLIVLWRPPVKKDKAIDEDRMPGPRDVKVLKFSKRGGQ
HHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
RPEVKQLRVLGNQRLTPGGQIKRAKKPKQTSVKKRQAD
CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
PQIQLTPAERREHRANAHHLDPVVMIGGDGLTAAVQKEVDAALSAHGLIKVRILGDDRA
CCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHH
AREQIYQQLADELNAAPIQHIGKLIVLWRPPVKKDKAIDEDRMPGPRDVKVLKFSKRGGQ
HHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
RPEVKQLRVLGNQRLTPGGQIKRAKKPKQTSVKKRQAD
CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]