Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611282
Identifier: 120611282
GI number: 120611282
Start: 2864847
End: 2865620
Strand: Reverse
Name: 120611282
Synonym: Aave_2614
Alternate gene names: NA
Gene position: 2865620-2864847 (Counterclockwise)
Preceding gene: 120611283
Following gene: 120611272
Centisome position: 53.54
GC content: 67.05
Gene sequence:
>774_bases ATGGGCACGGACATCGGCGCCGCCCGGGCGCAGGGGCCGGCGCATGCCCCCGGGCGCCACATCCTCTGCATGAAGTGGGG CACGAAGTACGGACCGGAATACGTGAACCGGCTCTACGCCATGGTGCGCCGGCATCTCACGGGCCCGTTCCGCTTCATCT GCCTGACGGACGATTCCCGGGGTATCCGGCAGGAGGTGGAGTGCTTTCCCATTCCCGCTCTCGAGCTGCCTGCGGGCATC CCGGAGCGCGGCTGGACCAAGCTGGCCACCTTCCACCCCGAGCTGTACGGGCTGCGCGGGACGGCACTGTTCCTCGACGT GGACGTGGTGGTGGTCGGCCCGCTGGACGATTTTTTCACCCAGCCGGGCGAATTCGTCATCATCCACGACTACAAGCGCC CCTGGCGGATCACCGGCAATTCGTCCGTCTATCGGTTCGAGATCGGCGCGCACCCGGGCGTGCTGGAATATTTTCGAGAG AACTTCGAGTCGATCCGCGCGCGATTCCGCAACGAACAGGCCTACCTGTCGGATTACCTGCACCGCCAGGGCAAGCTCAG CTACTGGCCCGCGGCCTGGTGCCCGAGCTTCAAGTACCACAGCATCCCGCCCTGGCCCGCCAACTACTGGCGGCCGCCGG CGATTCCAGCCGGTGCGCGCGTGGTGATCTTCCACGGAGAATGCAATCCGCCGGACGCCCTCGCAGGCCGGCGCAACCGC CGGTTCCGCCATATCGAGCCCACGCCCTGGGTGGCGGAGCACTGGCGGGAATGA
Upstream 100 bases:
>100_bases CCAGCGCCTGACGCCCGGCGGCCAGATCAAGCGCGCCAAGAAACCGAAGCAGACTTCCGTGAAGAAGCGGCAGGCGGATT GATGCAGGGGAACTGACGCG
Downstream 100 bases:
>100_bases CGCCACGGCAGGGCGAGTCCTTCGGCCGCCCTGCCGCCATGCGAGAGCCGGGAAAAGACACCGGCTGCGGCGGCGCGCCC CCTCTACCGATACGCCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MGTDIGAARAQGPAHAPGRHILCMKWGTKYGPEYVNRLYAMVRRHLTGPFRFICLTDDSRGIRQEVECFPIPALELPAGI PERGWTKLATFHPELYGLRGTALFLDVDVVVVGPLDDFFTQPGEFVIIHDYKRPWRITGNSSVYRFEIGAHPGVLEYFRE NFESIRARFRNEQAYLSDYLHRQGKLSYWPAAWCPSFKYHSIPPWPANYWRPPAIPAGARVVIFHGECNPPDALAGRRNR RFRHIEPTPWVAEHWRE
Sequences:
>Translated_257_residues MGTDIGAARAQGPAHAPGRHILCMKWGTKYGPEYVNRLYAMVRRHLTGPFRFICLTDDSRGIRQEVECFPIPALELPAGI PERGWTKLATFHPELYGLRGTALFLDVDVVVVGPLDDFFTQPGEFVIIHDYKRPWRITGNSSVYRFEIGAHPGVLEYFRE NFESIRARFRNEQAYLSDYLHRQGKLSYWPAAWCPSFKYHSIPPWPANYWRPPAIPAGARVVIFHGECNPPDALAGRRNR RFRHIEPTPWVAEHWRE >Mature_256_residues GTDIGAARAQGPAHAPGRHILCMKWGTKYGPEYVNRLYAMVRRHLTGPFRFICLTDDSRGIRQEVECFPIPALELPAGIP ERGWTKLATFHPELYGLRGTALFLDVDVVVVGPLDDFFTQPGEFVIIHDYKRPWRITGNSSVYRFEIGAHPGVLEYFREN FESIRARFRNEQAYLSDYLHRQGKLSYWPAAWCPSFKYHSIPPWPANYWRPPAIPAGARVVIFHGECNPPDALAGRRNRR FRHIEPTPWVAEHWRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29670; Mature: 29539
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTDIGAARAQGPAHAPGRHILCMKWGTKYGPEYVNRLYAMVRRHLTGPFRFICLTDDSR CCCCCCCHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC GIRQEVECFPIPALELPAGIPERGWTKLATFHPELYGLRGTALFLDVDVVVVGPLDDFFT CCHHHHHCCCCCHHHCCCCCCCCCCEEEEEECHHHHCCCCEEEEEEEEEEEECCCHHHHC QPGEFVIIHDYKRPWRITGNSSVYRFEIGAHPGVLEYFRENFESIRARFRNEQAYLSDYL CCCCEEEEECCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH HRQGKLSYWPAAWCPSFKYHSIPPWPANYWRPPAIPAGARVVIFHGECNPPDALAGRRNR HHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCC RFRHIEPTPWVAEHWRE CEEECCCCCCHHHHCCC >Mature Secondary Structure GTDIGAARAQGPAHAPGRHILCMKWGTKYGPEYVNRLYAMVRRHLTGPFRFICLTDDSR CCCCCCHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC GIRQEVECFPIPALELPAGIPERGWTKLATFHPELYGLRGTALFLDVDVVVVGPLDDFFT CCHHHHHCCCCCHHHCCCCCCCCCCEEEEEECHHHHCCCCEEEEEEEEEEEECCCHHHHC QPGEFVIIHDYKRPWRITGNSSVYRFEIGAHPGVLEYFRENFESIRARFRNEQAYLSDYL CCCCEEEEECCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH HRQGKLSYWPAAWCPSFKYHSIPPWPANYWRPPAIPAGARVVIFHGECNPPDALAGRRNR HHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCC RFRHIEPTPWVAEHWRE CEEECCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA