Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611254
Identifier: 120611254
GI number: 120611254
Start: 2832486
End: 2833202
Strand: Reverse
Name: 120611254
Synonym: Aave_2586
Alternate gene names: NA
Gene position: 2833202-2832486 (Counterclockwise)
Preceding gene: 120611255
Following gene: 120611253
Centisome position: 52.93
GC content: 71.55
Gene sequence:
>717_bases ATGCCCTGTACAGCGCGCCCCCCACAGCCCACGCATACCGCCTGCGGCCTCTGCCTGCTGCTGGCCTGCGCGCTTCCGGT GGCCGGCACGGCCCAGACCCGGGACGTCTCCGGCGAACTGGCCGTCAGCAGCGACCTGATCGAACGGGGAATTTTCGTGG GCCGCCCCCGGCCCATCGTCCAGGGCCTTCTCAGCTTCTACGACGCCCGCGGCTGGTCCGTCAGCGCCGCGCTCGGCATG CAGACCTATGGTTCCCGCTCCACGCGCGCCATCGTGCGGGGCGCCTACGACGGCGTGATCGACAACGACTGGCAGTACCA GGCATCGCTGCAGTACTACGCCTACCCGGGGGACCCGTTCTTCCGCCTGTTCGACCGCGCCGAAGCCACGGTGAGCACCA GCTTCCGGGACGTCTTCACCCTCGGCCTGTCCGCGTTCCGCTACGTCCACACCCGGGACGAAATCTCCCCCATGCGCTGG GCGCTCGACGCGGGCGCCCGCTGGCCGCTGGCGCCCCGGTGGTCCCTGGTCGGCTCGCTCGGCGTCTCGGCCGTGCGCCC CCGCGGCCAGTATGCCTACGGCAGCGTGGGAACCACGTGGGCGGCCGGCCCCTGGCGCGCCGAGCTGAACTACCTTGCGT CCGACCGCTGGGCGCAGCGCCATATCATGGGTGCCAGCGCGGGCCGCTGGACCGTCACCGTCATCCGCACCTTCTGA
Upstream 100 bases:
>100_bases TGCCGCGAGGAAGCTTCCCGGGCGCCGCGGGACGCGGCGTCCGGGGGGTACCCGACGACGAACTGCCGGAAGCCTCCGGA ACCCGCTCTAAACTGCGCGC
Downstream 100 bases:
>100_bases CGCGGACCGGCGTGCAACCTTTCCGCTGCACAGGCGCACCCACCGCAACCAGGACGGCACGTTTTCCCGGTGGCCCATGA CCGCTCACTATCCAGACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MPCTARPPQPTHTACGLCLLLACALPVAGTAQTRDVSGELAVSSDLIERGIFVGRPRPIVQGLLSFYDARGWSVSAALGM QTYGSRSTRAIVRGAYDGVIDNDWQYQASLQYYAYPGDPFFRLFDRAEATVSTSFRDVFTLGLSAFRYVHTRDEISPMRW ALDAGARWPLAPRWSLVGSLGVSAVRPRGQYAYGSVGTTWAAGPWRAELNYLASDRWAQRHIMGASAGRWTVTVIRTF
Sequences:
>Translated_238_residues MPCTARPPQPTHTACGLCLLLACALPVAGTAQTRDVSGELAVSSDLIERGIFVGRPRPIVQGLLSFYDARGWSVSAALGM QTYGSRSTRAIVRGAYDGVIDNDWQYQASLQYYAYPGDPFFRLFDRAEATVSTSFRDVFTLGLSAFRYVHTRDEISPMRW ALDAGARWPLAPRWSLVGSLGVSAVRPRGQYAYGSVGTTWAAGPWRAELNYLASDRWAQRHIMGASAGRWTVTVIRTF >Mature_237_residues PCTARPPQPTHTACGLCLLLACALPVAGTAQTRDVSGELAVSSDLIERGIFVGRPRPIVQGLLSFYDARGWSVSAALGMQ TYGSRSTRAIVRGAYDGVIDNDWQYQASLQYYAYPGDPFFRLFDRAEATVSTSFRDVFTLGLSAFRYVHTRDEISPMRWA LDAGARWPLAPRWSLVGSLGVSAVRPRGQYAYGSVGTTWAAGPWRAELNYLASDRWAQRHIMGASAGRWTVTVIRTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26192; Mature: 26061
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCTARPPQPTHTACGLCLLLACALPVAGTAQTRDVSGELAVSSDLIERGIFVGRPRPIV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEECCCCHHHH QGLLSFYDARGWSVSAALGMQTYGSRSTRAIVRGAYDGVIDNDWQYQASLQYYAYPGDPF HHHHHHHHCCCCEEEHHHCHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCHH FRLFDRAEATVSTSFRDVFTLGLSAFRYVHTRDEISPMRWALDAGARWPLAPRWSLVGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHC GVSAVRPRGQYAYGSVGTTWAAGPWRAELNYLASDRWAQRHIMGASAGRWTVTVIRTF CCHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC >Mature Secondary Structure PCTARPPQPTHTACGLCLLLACALPVAGTAQTRDVSGELAVSSDLIERGIFVGRPRPIV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEECCCCHHHH QGLLSFYDARGWSVSAALGMQTYGSRSTRAIVRGAYDGVIDNDWQYQASLQYYAYPGDPF HHHHHHHHCCCCEEEHHHCHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCHH FRLFDRAEATVSTSFRDVFTLGLSAFRYVHTRDEISPMRWALDAGARWPLAPRWSLVGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHC GVSAVRPRGQYAYGSVGTTWAAGPWRAELNYLASDRWAQRHIMGASAGRWTVTVIRTF CCHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA