Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611190
Identifier: 120611190
GI number: 120611190
Start: 2764834
End: 2765397
Strand: Reverse
Name: 120611190
Synonym: Aave_2521
Alternate gene names: NA
Gene position: 2765397-2764834 (Counterclockwise)
Preceding gene: 120611192
Following gene: 120611189
Centisome position: 51.66
GC content: 66.49
Gene sequence:
>564_bases ATGACCATGACTTTCCAGGACCTGCAGGCGAAAGCCATCGCCTGGTGCAAGGATTTCGAGCAATACAAGGACGAGTGCGT CGTCATGGCGCAGCGCCTGCGCGTGGAGTTCATCGCCCACCTGGGCGCGCGCTCGGGCGACGTAGAGTTCCACGTGCTGG ACGAGCGGCTGGAGCGCATCGCCGATGAGCGCACGTCCCTCTGGCCGCGCCTGCAGGCGGGCGACGACGGGTTCCTGTAT TTCGGCCTGACGCTTTTCTTCCGCGCGGACGCGCACTGCCTGGACGAGCACATCCGGGTGGGCATCCAGAAGTCGCGCAC GCACTGGCGCGTGCGCTGGAACCAGAAGGAATCGGTGTATTCCACTACCGGCTCCAACACGGCCTTTTTCGACAAGCTCA CCGCCATCACGATGGAGAAGTTCTCCACCCCGTTCCGGCGCATGAAGGGGCAGCTCGGCTTCGTGCCTATGCTGCAGAGC GAGCACCACGTCGTGGCCTCCGCGCCGCCGAGCCCCGCGACCGGCGCCGGGGCCAGCGCGCCCCAGGACGGCGGCGAAAG CTGA
Upstream 100 bases:
>100_bases GCGGCATACAACTGCCAAGGCTCCCACCCATGCCGCGACGGGCCCCGGAGCCTGTCGCCGCCCCGTCGGCTCCGCGTTCC TCGCCGGAAAGGACCCTCCC
Downstream 100 bases:
>100_bases ACGGCCGCTGCGACCGCACGCCGGACGCCCAGCGGCCGGCGGCGGTGTTGCAAATGGCGCGCGATCGCCCGCCGCCACCG TCGCGGCAGCCGGCCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTMTFQDLQAKAIAWCKDFEQYKDECVVMAQRLRVEFIAHLGARSGDVEFHVLDERLERIADERTSLWPRLQAGDDGFLY FGLTLFFRADAHCLDEHIRVGIQKSRTHWRVRWNQKESVYSTTGSNTAFFDKLTAITMEKFSTPFRRMKGQLGFVPMLQS EHHVVASAPPSPATGAGASAPQDGGES
Sequences:
>Translated_187_residues MTMTFQDLQAKAIAWCKDFEQYKDECVVMAQRLRVEFIAHLGARSGDVEFHVLDERLERIADERTSLWPRLQAGDDGFLY FGLTLFFRADAHCLDEHIRVGIQKSRTHWRVRWNQKESVYSTTGSNTAFFDKLTAITMEKFSTPFRRMKGQLGFVPMLQS EHHVVASAPPSPATGAGASAPQDGGES >Mature_186_residues TMTFQDLQAKAIAWCKDFEQYKDECVVMAQRLRVEFIAHLGARSGDVEFHVLDERLERIADERTSLWPRLQAGDDGFLYF GLTLFFRADAHCLDEHIRVGIQKSRTHWRVRWNQKESVYSTTGSNTAFFDKLTAITMEKFSTPFRRMKGQLGFVPMLQSE HHVVASAPPSPATGAGASAPQDGGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21187; Mature: 21056
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTFQDLQAKAIAWCKDFEQYKDECVVMAQRLRVEFIAHLGARSGDVEFHVLDERLERI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH ADERTSLWPRLQAGDDGFLYFGLTLFFRADAHCLDEHIRVGIQKSRTHWRVRWNQKESVY HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCHHCCCCEEEEEECCCCCEE STTGSNTAFFDKLTAITMEKFSTPFRRMKGQLGFVPMLQSEHHVVASAPPSPATGAGASA ECCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCC PQDGGES CCCCCCC >Mature Secondary Structure TMTFQDLQAKAIAWCKDFEQYKDECVVMAQRLRVEFIAHLGARSGDVEFHVLDERLERI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH ADERTSLWPRLQAGDDGFLYFGLTLFFRADAHCLDEHIRVGIQKSRTHWRVRWNQKESVY HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCHHCCCCEEEEEECCCCCEE STTGSNTAFFDKLTAITMEKFSTPFRRMKGQLGFVPMLQSEHHVVASAPPSPATGAGASA ECCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCC PQDGGES CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA