Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is pheC [H]
Identifier: 120611141
GI number: 120611141
Start: 2702424
End: 2703206
Strand: Direct
Name: pheC [H]
Synonym: Aave_2470
Alternate gene names: 120611141
Gene position: 2702424-2703206 (Clockwise)
Preceding gene: 120611140
Following gene: 120611145
Centisome position: 50.49
GC content: 67.82
Gene sequence:
>783_bases ATGCAGCGCACGTCCGCCGCCACCCTCATCGCCACCGCCGCCCTGGCGGCCGCCGGCTTCCTGCAGGCCGCCCATGCCGG GCCCCGGCTCGACCGGATCATGGACACCAAGGTGCTGCGCGTCGGCACGCCCGGCGACTACCGGCCCTTCGCCATCAAGG CCGATGGCGGCTATGCCGGCCACGACATCGATGTGGTCGAGGCCATGGCGAAGGAACTGGGCGTGAAGATCGAATACGTG CCCACGAGCTGGCCCAACCTGATGAAGGACATCCAGGCCGACAGGTTCGACGTGGCCGTGGGCGGCATCACGCGCAATGT CACGCGCATCCGCCAGATCGAAATGCTGCCGGGCTACGCGCCGTTCGGCAAGGTGGCGCTGGTGCGGGCCTCCGACAAGG ACAGGTTCCGGGCCCTGGCCGATCTGAACCGGCCGGGCGTGCGCGTCATCAAGAACCCGGGCGGCACCAACGAAACCTTC GTGCTGGAGAACCTCAAGGCGGCCGATGTCAGCACGCACGACAAGAACGCCGAGATCCCCGCGCTCATCGCCGAGGGCAA GGGCGACGTGATGATCACCGAGACGTACGAGGCCCTGCACTACGCCAAGGCCGACCCGCGCCTCCATGCGGCTTTCGTCG CCGCGCCGCTCACGCCGCAGAACACCCTGGGATTCATGCTGCCCAAGGACGACGCGGACTATTCGCGCGTGATGGAGTTC GTCTGGGGCCTGATGGAAGCCCGCGGCCAGCTCAAGCAGGCGGCCGACAAGTGGCTCAAGTGA
Upstream 100 bases:
>100_bases GGCGCGGCCGTGGCCGGGCGGAGTCCCTGCGGATCTCCGGAGCGCGGCATTTGTCCGGGACCGCCATCCCTTTTGCAACG AACCCTCGAAGGCCCCTCGC
Downstream 100 bases:
>100_bases ACGTGCGGGCGGGTCTGCCGGCCTGAGCCGTTCAGCCTGCCATCCACTGCGCCGTGCGTACGGCCAGTGCGGCGGCATCG GGCCGGGCGGCCGGGTCTTC
Product: cyclohexadienyl dehydratase
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MQRTSAATLIATAALAAAGFLQAAHAGPRLDRIMDTKVLRVGTPGDYRPFAIKADGGYAGHDIDVVEAMAKELGVKIEYV PTSWPNLMKDIQADRFDVAVGGITRNVTRIRQIEMLPGYAPFGKVALVRASDKDRFRALADLNRPGVRVIKNPGGTNETF VLENLKAADVSTHDKNAEIPALIAEGKGDVMITETYEALHYAKADPRLHAAFVAAPLTPQNTLGFMLPKDDADYSRVMEF VWGLMEARGQLKQAADKWLK
Sequences:
>Translated_260_residues MQRTSAATLIATAALAAAGFLQAAHAGPRLDRIMDTKVLRVGTPGDYRPFAIKADGGYAGHDIDVVEAMAKELGVKIEYV PTSWPNLMKDIQADRFDVAVGGITRNVTRIRQIEMLPGYAPFGKVALVRASDKDRFRALADLNRPGVRVIKNPGGTNETF VLENLKAADVSTHDKNAEIPALIAEGKGDVMITETYEALHYAKADPRLHAAFVAAPLTPQNTLGFMLPKDDADYSRVMEF VWGLMEARGQLKQAADKWLK >Mature_260_residues MQRTSAATLIATAALAAAGFLQAAHAGPRLDRIMDTKVLRVGTPGDYRPFAIKADGGYAGHDIDVVEAMAKELGVKIEYV PTSWPNLMKDIQADRFDVAVGGITRNVTRIRQIEMLPGYAPFGKVALVRASDKDRFRALADLNRPGVRVIKNPGGTNETF VLENLKAADVSTHDKNAEIPALIAEGKGDVMITETYEALHYAKADPRLHAAFVAAPLTPQNTLGFMLPKDDADYSRVMEF VWGLMEARGQLKQAADKWLK
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=260, Percent_Identity=23.8461538461538, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787031, Length=250, Percent_Identity=24, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 28346; Mature: 28346
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRTSAATLIATAALAAAGFLQAAHAGPRLDRIMDTKVLRVGTPGDYRPFAIKADGGYAG CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCCCCCCEEEEECCCCCC HDIDVVEAMAKELGVKIEYVPTSWPNLMKDIQADRFDVAVGGITRNVTRIRQIEMLPGYA CCHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCC PFGKVALVRASDKDRFRALADLNRPGVRVIKNPGGTNETFVLENLKAADVSTHDKNAEIP CCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC ALIAEGKGDVMITETYEALHYAKADPRLHAAFVAAPLTPQNTLGFMLPKDDADYSRVMEF EEEECCCCCEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHH VWGLMEARGQLKQAADKWLK HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQRTSAATLIATAALAAAGFLQAAHAGPRLDRIMDTKVLRVGTPGDYRPFAIKADGGYAG CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCCCCCCEEEEECCCCCC HDIDVVEAMAKELGVKIEYVPTSWPNLMKDIQADRFDVAVGGITRNVTRIRQIEMLPGYA CCHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCC PFGKVALVRASDKDRFRALADLNRPGVRVIKNPGGTNETFVLENLKAADVSTHDKNAEIP CCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCC ALIAEGKGDVMITETYEALHYAKADPRLHAAFVAAPLTPQNTLGFMLPKDDADYSRVMEF EEEECCCCCEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHH VWGLMEARGQLKQAADKWLK HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]