Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is pbpG [H]

Identifier: 120611140

GI number: 120611140

Start: 2699692

End: 2702232

Strand: Direct

Name: pbpG [H]

Synonym: Aave_2469

Alternate gene names: 120611140

Gene position: 2699692-2702232 (Clockwise)

Preceding gene: 120611139

Following gene: 120611141

Centisome position: 50.44

GC content: 70.09

Gene sequence:

>2541_bases
ATGCTGCTGTGGGCGCTGGCCGCGGTGCCGGCCGCGCTGTTGGTTTACACGCTGCTGCTCTGGCCCTTCACGCCCGCGAT
CAGCGACATCCGCAAGGCCAAGACCGAGCAGCCGGCCCAGCTCGTGTCGGCCGATGGCCGCCTGCTGGCCGAGTACCGCT
GGGTGAACCGGGAATGGGTGGCGCTGGAGGACATCGCACCGTCGGTGGTGGATGCGCTGATCGCCACCGAGGACCACCGC
TTCTACGACCATTTCGGGCTGGACTGGCGGCGCACCGGGTCGGCCCTGATCCGCACCCTGGGAGGCAACAAGCAGGGCGG
ATCGACCATCACGCAGCAGCTGGCTCGCAATCTCTACCCCGAGGACGTGGGCCGCGCCCCCACGCTGACGCGCAAGCTCA
AGGAAGCGATCACGGCGCTGAAGATCGAGGCGCTGTATTCCAAGGACGAGATCCTGGAAACCTATCTCAACACCGTGCCT
TTCCTCTACAACGCCTACGGCATCGAGATGGCGGCGCGCACCTATTTCGACAAGTCGGCCGACAAGCTCACGGTGCTGGA
GAGCGCGACGCTCATCGGCATGCTCAAGGGCACGAGCTACTACAACCCGGTGCTGAATCCGGAGCGCGCCCAGGCGCGGC
GCAACGTGGTGCTGGCGCAGATGGAAAAGCGCGGCAAGCTGTCGTCCAGGGATTTCGATACCCTGTCGAAGCGGCCCCTG
CGCATCCGGTTCGAGCGCCAGCTGGAGGCCGCGGGCCCTGCACCCCATCTGGCCCAGCAACTGCGCAAGCAGCTCATCGA
CTGGGCCGACCGCAATGGATACAGCCTGTACGCCGACGGCCTGGTGATCCGCACGACCATCGATTTCCGGTTGCAGACCC
TGGCCAACCAGGCGGTGGCCCGGCAGGGCCGTCAGCTGCAATCCGTCGCCGACGGGGCGTGGGGACCGCGGGTCTGGAAT
GCCAGGAGTCCCCTGGTGCAGACCTTCGTGCGGGAGTCGGCCCAGTACGCCGCTGCCGTGGCCAAGGGCATGTCCGAAGA
CGACGCCCTCAAGTCGCTGCTGGCGGACGCGGACTTCATGCGCAAGCTGCGCCAGGACAAGACCCGCGTGCAGGCGGGCT
TCCTGGCGATGGATCCCCGCACCGGCCAGGTCCGCGCATGGGTGGGCAGCCGCGATTTCGCGCAGGATCCATTCGACCAC
GTGCAGGCGGCGCGGCGGCAGCCGGGCTCGACCTTCAAGCCCTTCGTCTATGGAGCCGCCTTCGCCAAGGGGGCCCTGCC
CACCGATACGCTGATCGACCAGGCCGTGGAGATCCCGCTGGGCGGCGGCCGGATGTGGCGTCCCACGGACGAAGGCGCCG
CGCCGAGCGGCGAGCCGATGACGCTGAGCGACGGGCTGGCCTATTCCAAGAACACGATCACCGCGCAACTGATGCAGCGG
GTCGGACCGGAACGCGTGGCCGACCTGGCGCGCGCCATGGGCGTGCGGGAGTCCCCGCTGGATGCCGTGCCGTCCCTGGC
GCTGGGCACGAGCCCTGTCACGCTCAAGGAGATGGTGGCGGCGTACGGGACCATCGCCGAGGCGGGCCGCTACATCGCGC
CCACGGTCATCACGCGCATCGAGGACAAGAACGGCAAGGTGCTGGAGGATTTCAGCCCGGCGGTCCCGGAGCGCGTGCTG
GGGCTGGGCCCCGCGCAGATGCTGCGCAATGCGCTGCGCGCCGTGGTGGACAAGGGCACGGGCGCCGCCATCCGGTCGCG
CTACGGCATCACGGCGGACGTGGCGGGCAAGACCGGCACGACGCAGGACGCCGCGGATGGATGGTTCCTGCTCATGCATC
CGCAACTGGTGGCGGGCGCCTGGGCCGGCTTCAACGACGGCCGCGTGACGCTGCGCAGCGACTACTGGGGTCAGGGCGCG
CACAGCGCGCTGCCGATGGTCGGCGACGTCTTCCAGCAGGCCTTGCGCTCGCGCGTGATCGACCCCGGAGAGAAATTCAT
CGACCAGGAGGAAAGCAGCTGGGTCGGCCAGGCGGTGGATGGCGTGCGGCAGTGGGCGCTCTCCGTCTATGACCTGTTCG
GGCGGCGCACCGATGCGCAGGCCGGAGGCGCGGGGGCGGAGCCGCCGGCGAGAGCGCCCGTGCCGTCTGCCAGTGCACCT
GCCAGCGCACCCGCGGATACACGGCCCGAGATCACCGAGGCGCCGTTGACGCCGCTGCAGGATGCAACACCCAGCGCGCC
GTATGTTCCCCCGGCCGAGGTGGACCTGCCTGCGGAGAATGCGGGCTCTGCGCCGCCCCCGGCCACCCCGGGCGGCAGCG
GAACGCTGCCGCCGGTGACCACCGACCCGCCCGGGTCCACGGTGCCGGGCACTGTGCCCGGGGCCTCGCCCGGGCCATCC
GGTGGCGTTGGTGGTGCGGGTGGCTCGAATGGTCCGGACGGGACCGGTGCTGCGCCCAGCGTCGAGGTTGCGCCCGTCCA
GCGCGGCACCGTCGTGCCGGGGAGCGCGCAGCAGCCGTTCTTCGTCGAATCGCGCCCTTGA

Upstream 100 bases:

>100_bases
CGCTTCCCTGCGCTCCTGGTTGTCCAGCGGGCCGTTTTCCTCGCTGACCCGCCGCGCTGGCGCCGCGCTGCGCTGGTTCC
TTGCCCGGCGGCCAGCCCGG

Downstream 100 bases:

>100_bases
GCGCTGTAAAGGGCGCTGCGGTTCCGCGGAGCGGATCCGCGCCGTCGGGACCGGCCGGGCACGTTCCCTGCAATACCCGG
CGCGGTATGCTGGCGCGGCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: PBP-2D; PBP2d [H]

Number of amino acids: Translated: 846; Mature: 846

Protein sequence:

>846_residues
MLLWALAAVPAALLVYTLLLWPFTPAISDIRKAKTEQPAQLVSADGRLLAEYRWVNREWVALEDIAPSVVDALIATEDHR
FYDHFGLDWRRTGSALIRTLGGNKQGGSTITQQLARNLYPEDVGRAPTLTRKLKEAITALKIEALYSKDEILETYLNTVP
FLYNAYGIEMAARTYFDKSADKLTVLESATLIGMLKGTSYYNPVLNPERAQARRNVVLAQMEKRGKLSSRDFDTLSKRPL
RIRFERQLEAAGPAPHLAQQLRKQLIDWADRNGYSLYADGLVIRTTIDFRLQTLANQAVARQGRQLQSVADGAWGPRVWN
ARSPLVQTFVRESAQYAAAVAKGMSEDDALKSLLADADFMRKLRQDKTRVQAGFLAMDPRTGQVRAWVGSRDFAQDPFDH
VQAARRQPGSTFKPFVYGAAFAKGALPTDTLIDQAVEIPLGGGRMWRPTDEGAAPSGEPMTLSDGLAYSKNTITAQLMQR
VGPERVADLARAMGVRESPLDAVPSLALGTSPVTLKEMVAAYGTIAEAGRYIAPTVITRIEDKNGKVLEDFSPAVPERVL
GLGPAQMLRNALRAVVDKGTGAAIRSRYGITADVAGKTGTTQDAADGWFLLMHPQLVAGAWAGFNDGRVTLRSDYWGQGA
HSALPMVGDVFQQALRSRVIDPGEKFIDQEESSWVGQAVDGVRQWALSVYDLFGRRTDAQAGGAGAEPPARAPVPSASAP
ASAPADTRPEITEAPLTPLQDATPSAPYVPPAEVDLPAENAGSAPPPATPGGSGTLPPVTTDPPGSTVPGTVPGASPGPS
GGVGGAGGSNGPDGTGAAPSVEVAPVQRGTVVPGSAQQPFFVESRP

Sequences:

>Translated_846_residues
MLLWALAAVPAALLVYTLLLWPFTPAISDIRKAKTEQPAQLVSADGRLLAEYRWVNREWVALEDIAPSVVDALIATEDHR
FYDHFGLDWRRTGSALIRTLGGNKQGGSTITQQLARNLYPEDVGRAPTLTRKLKEAITALKIEALYSKDEILETYLNTVP
FLYNAYGIEMAARTYFDKSADKLTVLESATLIGMLKGTSYYNPVLNPERAQARRNVVLAQMEKRGKLSSRDFDTLSKRPL
RIRFERQLEAAGPAPHLAQQLRKQLIDWADRNGYSLYADGLVIRTTIDFRLQTLANQAVARQGRQLQSVADGAWGPRVWN
ARSPLVQTFVRESAQYAAAVAKGMSEDDALKSLLADADFMRKLRQDKTRVQAGFLAMDPRTGQVRAWVGSRDFAQDPFDH
VQAARRQPGSTFKPFVYGAAFAKGALPTDTLIDQAVEIPLGGGRMWRPTDEGAAPSGEPMTLSDGLAYSKNTITAQLMQR
VGPERVADLARAMGVRESPLDAVPSLALGTSPVTLKEMVAAYGTIAEAGRYIAPTVITRIEDKNGKVLEDFSPAVPERVL
GLGPAQMLRNALRAVVDKGTGAAIRSRYGITADVAGKTGTTQDAADGWFLLMHPQLVAGAWAGFNDGRVTLRSDYWGQGA
HSALPMVGDVFQQALRSRVIDPGEKFIDQEESSWVGQAVDGVRQWALSVYDLFGRRTDAQAGGAGAEPPARAPVPSASAP
ASAPADTRPEITEAPLTPLQDATPSAPYVPPAEVDLPAENAGSAPPPATPGGSGTLPPVTTDPPGSTVPGTVPGASPGPS
GGVGGAGGSNGPDGTGAAPSVEVAPVQRGTVVPGSAQQPFFVESRP
>Mature_846_residues
MLLWALAAVPAALLVYTLLLWPFTPAISDIRKAKTEQPAQLVSADGRLLAEYRWVNREWVALEDIAPSVVDALIATEDHR
FYDHFGLDWRRTGSALIRTLGGNKQGGSTITQQLARNLYPEDVGRAPTLTRKLKEAITALKIEALYSKDEILETYLNTVP
FLYNAYGIEMAARTYFDKSADKLTVLESATLIGMLKGTSYYNPVLNPERAQARRNVVLAQMEKRGKLSSRDFDTLSKRPL
RIRFERQLEAAGPAPHLAQQLRKQLIDWADRNGYSLYADGLVIRTTIDFRLQTLANQAVARQGRQLQSVADGAWGPRVWN
ARSPLVQTFVRESAQYAAAVAKGMSEDDALKSLLADADFMRKLRQDKTRVQAGFLAMDPRTGQVRAWVGSRDFAQDPFDH
VQAARRQPGSTFKPFVYGAAFAKGALPTDTLIDQAVEIPLGGGRMWRPTDEGAAPSGEPMTLSDGLAYSKNTITAQLMQR
VGPERVADLARAMGVRESPLDAVPSLALGTSPVTLKEMVAAYGTIAEAGRYIAPTVITRIEDKNGKVLEDFSPAVPERVL
GLGPAQMLRNALRAVVDKGTGAAIRSRYGITADVAGKTGTTQDAADGWFLLMHPQLVAGAWAGFNDGRVTLRSDYWGQGA
HSALPMVGDVFQQALRSRVIDPGEKFIDQEESSWVGQAVDGVRQWALSVYDLFGRRTDAQAGGAGAEPPARAPVPSASAP
ASAPADTRPEITEAPLTPLQDATPSAPYVPPAEVDLPAENAGSAPPPATPGGSGTLPPVTTDPPGSTVPGTVPGASPGPS
GGVGGAGGSNGPDGTGAAPSVEVAPVQRGTVVPGSAQQPFFVESRP

Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]

COG id: COG0744

COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transpeptidase family [H]

Homologues:

Organism=Escherichia coli, GI87082258, Length=306, Percent_Identity=40.8496732026144, Blast_Score=199, Evalue=7e-52,
Organism=Escherichia coli, GI1786343, Length=574, Percent_Identity=28.9198606271777, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI1788867, Length=661, Percent_Identity=27.5340393343419, Blast_Score=146, Evalue=6e-36,
Organism=Escherichia coli, GI1789601, Length=185, Percent_Identity=35.1351351351351, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001264
- InterPro:   IPR011816
- InterPro:   IPR001460 [H]

Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]

EC number: 2.4.2.-; 3.4.-.- [C]

Molecular weight: Translated: 90567; Mature: 90567

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLWALAAVPAALLVYTLLLWPFTPAISDIRKAKTEQPAQLVSADGRLLAEYRWVNREWV
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCEE
ALEDIAPSVVDALIATEDHRFYDHFGLDWRRTGSALIRTLGGNKQGGSTITQQLARNLYP
EHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCH
EDVGRAPTLTRKLKEAITALKIEALYSKDEILETYLNTVPFLYNAYGIEMAARTYFDKSA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKLTVLESATLIGMLKGTSYYNPVLNPERAQARRNVVLAQMEKRGKLSSRDFDTLSKRPL
CCEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCE
RIRFERQLEAAGPAPHLAQQLRKQLIDWADRNGYSLYADGLVIRTTIDFRLQTLANQAVA
EEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEHHHHHHHHHHHHHH
RQGRQLQSVADGAWGPRVWNARSPLVQTFVRESAQYAAAVAKGMSEDDALKSLLADADFM
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RKLRQDKTRVQAGFLAMDPRTGQVRAWVGSRDFAQDPFDHVQAARRQPGSTFKPFVYGAA
HHHHHHHHHHHHCEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH
FAKGALPTDTLIDQAVEIPLGGGRMWRPTDEGAAPSGEPMTLSDGLAYSKNTITAQLMQR
HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH
VGPERVADLARAMGVRESPLDAVPSLALGTSPVTLKEMVAAYGTIAEAGRYIAPTVITRI
HCHHHHHHHHHHHCCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEE
EDKNGKVLEDFSPAVPERVLGLGPAQMLRNALRAVVDKGTGAAIRSRYGITADVAGKTGT
ECCCCCEEHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCC
TQDAADGWFLLMHPQLVAGAWAGFNDGRVTLRSDYWGQGAHSALPMVGDVFQQALRSRVI
CCCCCCCEEEEECCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
DPGEKFIDQEESSWVGQAVDGVRQWALSVYDLFGRRTDAQAGGAGAEPPARAPVPSASAP
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASAPADTRPEITEAPLTPLQDATPSAPYVPPAEVDLPAENAGSAPPPATPGGSGTLPPVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDPPGSTVPGTVPGASPGPSGGVGGAGGSNGPDGTGAAPSVEVAPVQRGTVVPGSAQQPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCE
FVESRP
EECCCC
>Mature Secondary Structure
MLLWALAAVPAALLVYTLLLWPFTPAISDIRKAKTEQPAQLVSADGRLLAEYRWVNREWV
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCEE
ALEDIAPSVVDALIATEDHRFYDHFGLDWRRTGSALIRTLGGNKQGGSTITQQLARNLYP
EHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCH
EDVGRAPTLTRKLKEAITALKIEALYSKDEILETYLNTVPFLYNAYGIEMAARTYFDKSA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKLTVLESATLIGMLKGTSYYNPVLNPERAQARRNVVLAQMEKRGKLSSRDFDTLSKRPL
CCEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCE
RIRFERQLEAAGPAPHLAQQLRKQLIDWADRNGYSLYADGLVIRTTIDFRLQTLANQAVA
EEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEHHHHHHHHHHHHHH
RQGRQLQSVADGAWGPRVWNARSPLVQTFVRESAQYAAAVAKGMSEDDALKSLLADADFM
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RKLRQDKTRVQAGFLAMDPRTGQVRAWVGSRDFAQDPFDHVQAARRQPGSTFKPFVYGAA
HHHHHHHHHHHHCEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH
FAKGALPTDTLIDQAVEIPLGGGRMWRPTDEGAAPSGEPMTLSDGLAYSKNTITAQLMQR
HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHH
VGPERVADLARAMGVRESPLDAVPSLALGTSPVTLKEMVAAYGTIAEAGRYIAPTVITRI
HCHHHHHHHHHHHCCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEE
EDKNGKVLEDFSPAVPERVLGLGPAQMLRNALRAVVDKGTGAAIRSRYGITADVAGKTGT
ECCCCCEEHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCC
TQDAADGWFLLMHPQLVAGAWAGFNDGRVTLRSDYWGQGAHSALPMVGDVFQQALRSRVI
CCCCCCCEEEEECCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
DPGEKFIDQEESSWVGQAVDGVRQWALSVYDLFGRRTDAQAGGAGAEPPARAPVPSASAP
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASAPADTRPEITEAPLTPLQDATPSAPYVPPAEVDLPAENAGSAPPPATPGGSGTLPPVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDPPGSTVPGTVPGASPGPSGGVGGAGGSNGPDGTGAAPSVEVAPVQRGTVVPGSAQQPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCE
FVESRP
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]