Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611092
Identifier: 120611092
GI number: 120611092
Start: 2644257
End: 2644625
Strand: Reverse
Name: 120611092
Synonym: Aave_2421
Alternate gene names: NA
Gene position: 2644625-2644257 (Counterclockwise)
Preceding gene: 120611093
Following gene: 120611090
Centisome position: 49.41
GC content: 62.6
Gene sequence:
>369_bases ATGCCATCAATGCTCTGCCCAGCACAACTTCAGGTACAGCAAACACCGGACCCTGCCGCCGAACCTGGTTGGCAGGTCCA AGGCACCCGCAAGAGCCACCCACTGGTGACGGTGTCGTTCTTTGCAGGGCCGCCCGAGCAGAAAGCCCAGTTGGTCCCTG CCAAGGAGAGCAAAAAGGGCAAGTCGTCCACGGCGACCTGGGAACTGGAGCGCCGGGACCAGCCCTACTGGGTTGCCTGC GAATATGGCGGCACCTCCGCCATCGCCACACGCGCACTTCCTGTGGACGTGACCGCCTGCACGGTGGAATACGACCCTAA CTTCTCGGAACCGGTCATGAAGCGGTGGAGCTGCCGGTCTGGCAGATGA
Upstream 100 bases:
>100_bases CAATATGCGCTTCGTTCCCACCTTGCTCGCTGCAGCCTCCATCGCTATACCCGGGGCTTCAGTACATGCAGCTCGGCCGG TAAAAGCTGGGCAGGAAACA
Downstream 100 bases:
>100_bases TGCAGGACGGATGGGGCGGCCCCGTGTCCGCGACGGTCACGGCCGCGCCGCCGCCACGCGCCACAGGGTGTTGCCGACGT CGTCGGCCACGAGCAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MPSMLCPAQLQVQQTPDPAAEPGWQVQGTRKSHPLVTVSFFAGPPEQKAQLVPAKESKKGKSSTATWELERRDQPYWVAC EYGGTSAIATRALPVDVTACTVEYDPNFSEPVMKRWSCRSGR
Sequences:
>Translated_122_residues MPSMLCPAQLQVQQTPDPAAEPGWQVQGTRKSHPLVTVSFFAGPPEQKAQLVPAKESKKGKSSTATWELERRDQPYWVAC EYGGTSAIATRALPVDVTACTVEYDPNFSEPVMKRWSCRSGR >Mature_121_residues PSMLCPAQLQVQQTPDPAAEPGWQVQGTRKSHPLVTVSFFAGPPEQKAQLVPAKESKKGKSSTATWELERRDQPYWVACE YGGTSAIATRALPVDVTACTVEYDPNFSEPVMKRWSCRSGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13467; Mature: 13336
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSMLCPAQLQVQQTPDPAAEPGWQVQGTRKSHPLVTVSFFAGPPEQKAQLVPAKESKKG CCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCCC KSSTATWELERRDQPYWVACEYGGTSAIATRALPVDVTACTVEYDPNFSEPVMKRWSCRS CCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCCHHHHHCCCCC GR CC >Mature Secondary Structure PSMLCPAQLQVQQTPDPAAEPGWQVQGTRKSHPLVTVSFFAGPPEQKAQLVPAKESKKG CCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCCC KSSTATWELERRDQPYWVACEYGGTSAIATRALPVDVTACTVEYDPNFSEPVMKRWSCRS CCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCCHHHHHCCCCC GR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA