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The map label for this gene is hslR [H]

Identifier: 120611090

GI number: 120611090

Start: 2642274

End: 2642693

Strand: Reverse

Name: hslR [H]

Synonym: Aave_2419

Alternate gene names: 120611090

Gene position: 2642693-2642274 (Counterclockwise)

Preceding gene: 120611092

Following gene: 120611088

Centisome position: 49.37

GC content: 71.9

Gene sequence:

>420_bases
ATGACCCCTCCCGAATCGATGCGCCTGGACAAGTGGCTGTGGTGCGCGCGCTTCTACAAGACCCGGGCCCTGGCGGCGGA
AGAGATCGGCAAGGGCCGCGTGGTGGTGAACGGACAGGCCGCCAAGGCGTCGCGGGAACTGCGCAGCGGCGATACCGTGG
CGCTGCGCCAGGGCCATGTGCCTCGCACGGTGGTGGTGCGCGGGCTCAGCGCCATGCGCGGCCCCGCGCCCGTCGCGCAA
CAGCTGTATGAGGAAACGGCCGAGAGCATCGCCGCGCGCGCGCAGGCCGCAGAAATGCGCAGGCTCGCACCCGAGCCTGC
CGCCACCCTGCAGGAAGGCCGCCCCACCAAGCGAGACCGGCGCGAGATCGACCAGGCGCGCGACTGGGGCAGCCGCTGGA
GCGCGGCAATCGACGAGTGA

Upstream 100 bases:

>100_bases
GCCAGTCTCGCCACCGCCGCGCTGAAACCATGTCAGCCATCTTCGCCGAACGATGGCCTGCCGGGTACGGAACACCCAGG
TTCTCTGGGAAAATACCGCC

Downstream 100 bases:

>100_bases
GGTATGTGACAGACGCGAGCCGGGTCAGGACGAGGCATTGCCCGCCTGAGGCCTCAGCATGCGCAGCACCACGTTCAGAT
AATCGTCCATCCGCTGGCGC

Product: RNA-binding S4 domain-containing protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTPPESMRLDKWLWCARFYKTRALAAEEIGKGRVVVNGQAAKASRELRSGDTVALRQGHVPRTVVVRGLSAMRGPAPVAQ
QLYEETAESIAARAQAAEMRRLAPEPAATLQEGRPTKRDRREIDQARDWGSRWSAAIDE

Sequences:

>Translated_139_residues
MTPPESMRLDKWLWCARFYKTRALAAEEIGKGRVVVNGQAAKASRELRSGDTVALRQGHVPRTVVVRGLSAMRGPAPVAQ
QLYEETAESIAARAQAAEMRRLAPEPAATLQEGRPTKRDRREIDQARDWGSRWSAAIDE
>Mature_138_residues
TPPESMRLDKWLWCARFYKTRALAAEEIGKGRVVVNGQAAKASRELRSGDTVALRQGHVPRTVVVRGLSAMRGPAPVAQQ
LYEETAESIAARAQAAEMRRLAPEPAATLQEGRPTKRDRREIDQARDWGSRWSAAIDE

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=125, Percent_Identity=47.2, Blast_Score=102, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15467; Mature: 15336

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPESMRLDKWLWCARFYKTRALAAEEIGKGRVVVNGQAAKASRELRSGDTVALRQGHV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCEEEECCCCC
PRTVVVRGLSAMRGPAPVAQQLYEETAESIAARAQAAEMRRLAPEPAATLQEGRPTKRDR
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHH
REIDQARDWGSRWSAAIDE
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPPESMRLDKWLWCARFYKTRALAAEEIGKGRVVVNGQAAKASRELRSGDTVALRQGHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCEEEECCCCC
PRTVVVRGLSAMRGPAPVAQQLYEETAESIAARAQAAEMRRLAPEPAATLQEGRPTKRDR
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHH
REIDQARDWGSRWSAAIDE
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]