Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611093
Identifier: 120611093
GI number: 120611093
Start: 2644760
End: 2645110
Strand: Reverse
Name: 120611093
Synonym: Aave_2422
Alternate gene names: NA
Gene position: 2645110-2644760 (Counterclockwise)
Preceding gene: 120611095
Following gene: 120611092
Centisome position: 49.42
GC content: 52.99
Gene sequence:
>351_bases TTGGAGGGTAAACCATCTGTAGGCACCAAGCAATGCGTTGCTTTGGTGAAGTTCTATGCCAAAGCCCCGGCATCATCGCT ATGGCGGGAAGGTGCGCCTGTCAAAGGAAACATGCTTCTGCGCGAGGGCACGGCAATAGCGACTTTTGTGAATGGCAGAT ATCCCAACCACGCATCGGGCAACCACGCTGCTCTGTATGTAGGGCAGGACGCAGGGGGGATTTATGTCATAGATCAGTGG TCCAAAGTGAATAAGATCCAGGCGCGGAAATTGCCCTTTCTCGGCAAAAACAAACATGGAGGGTGGGCTGACCCCAGCAA TAACGGTGACGCTTTCTCTGTCGTGGAATGA
Upstream 100 bases:
>100_bases ATTAATAGAATCTCCTGCGCAATGATGAGACAAAGAGCAGCCTTATCATTCCGTTATTTTTATTATCTTTTATGCCATAC GCATACAACAGCCCAAAGCT
Downstream 100 bases:
>100_bases TGATGAAATTTCGTGGCAACTTGACGATTTTCCCCAATATGCGCTTCGTTCCCACCTTGCTCGCTGCAGCCTCCATCGCT ATACCCGGGGCTTCAGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MEGKPSVGTKQCVALVKFYAKAPASSLWREGAPVKGNMLLREGTAIATFVNGRYPNHASGNHAALYVGQDAGGIYVIDQW SKVNKIQARKLPFLGKNKHGGWADPSNNGDAFSVVE
Sequences:
>Translated_116_residues MEGKPSVGTKQCVALVKFYAKAPASSLWREGAPVKGNMLLREGTAIATFVNGRYPNHASGNHAALYVGQDAGGIYVIDQW SKVNKIQARKLPFLGKNKHGGWADPSNNGDAFSVVE >Mature_116_residues MEGKPSVGTKQCVALVKFYAKAPASSLWREGAPVKGNMLLREGTAIATFVNGRYPNHASGNHAALYVGQDAGGIYVIDQW SKVNKIQARKLPFLGKNKHGGWADPSNNGDAFSVVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12429; Mature: 12429
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGKPSVGTKQCVALVKFYAKAPASSLWREGAPVKGNMLLREGTAIATFVNGRYPNHASG CCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCC NHAALYVGQDAGGIYVIDQWSKVNKIQARKLPFLGKNKHGGWADPSNNGDAFSVVE CEEEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MEGKPSVGTKQCVALVKFYAKAPASSLWREGAPVKGNMLLREGTAIATFVNGRYPNHASG CCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCC NHAALYVGQDAGGIYVIDQWSKVNKIQARKLPFLGKNKHGGWADPSNNGDAFSVVE CEEEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA