Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611039
Identifier: 120611039
GI number: 120611039
Start: 2583581
End: 2584201
Strand: Direct
Name: 120611039
Synonym: Aave_2368
Alternate gene names: NA
Gene position: 2583581-2584201 (Clockwise)
Preceding gene: 120611038
Following gene: 120611040
Centisome position: 48.27
GC content: 71.98
Gene sequence:
>621_bases ATGGCATCGTGGGACAACTGGATGCCCGAGCTGGTGCTGGCTGCTCCCACGGCGCCCGCGCCGCTCATCCACCTGTGCAT CAACCGGGCTGCGCGCCAGTTCCTGCGGAAGACGCGCGCGTGGCAGGAATGGCTGGAGCCGGTCGATGTGTCGGGCACGC CCTTCGCCGAATACGCGTTCGAGCTGCCCCAGGGCGCCGAGCTGCGCCGCATCGAGGCGGCCACGCTGGACGGCAAGCCC CTGGAGGTGGCGAAGGAGGGGAGCTTGCCCGCTGACCCCTGGCGCCACGCGCGAGCGGGTTGCGCCTACCTCGTGACCAC TGACCTGGCCTCTTTCACCGTCGGCGCGCTCGGGGCTGGCGGCACCGTGCAGGTGCGGGCCTCGCTCATCCCCTCCACGC GCGGCACCAGCGTTCCCGACAGTGTGGCGCGGCTCTACCACGAGGCGATCCGTGACGGCGCTAAGGCGGAGCTGCTGGCC ACCGCCGGCACGGACTACTACCGGCCCGACCAGGCCGCCGTGGCGCTCGCGCTGTTCAGCGCCGCGATCGATGACGCAAC CACCGACGTGTGGCGCTCGCACACGCCGAGCACGCCGCGGGGGAGGGCGCAATGGCTCTGA
Upstream 100 bases:
>100_bases GGCCTCCACCGGCGACGGCCTACCCAAGGAAGACAACACCGCCCCCACGGGACGCGTGCGCAAGGCGGGTGCTGCCTCCC TGGTGAAGGGCTGACGCGCC
Downstream 100 bases:
>100_bases ACGTAAAGCAGCTGCTGGACGACGTGGCGCGCGAACTGCAGGACAAGGGGAGCGTCCGCTGGACGCGAGCCGACCTGCTC GACTTCTTCAATGCGGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MASWDNWMPELVLAAPTAPAPLIHLCINRAARQFLRKTRAWQEWLEPVDVSGTPFAEYAFELPQGAELRRIEAATLDGKP LEVAKEGSLPADPWRHARAGCAYLVTTDLASFTVGALGAGGTVQVRASLIPSTRGTSVPDSVARLYHEAIRDGAKAELLA TAGTDYYRPDQAAVALALFSAAIDDATTDVWRSHTPSTPRGRAQWL
Sequences:
>Translated_206_residues MASWDNWMPELVLAAPTAPAPLIHLCINRAARQFLRKTRAWQEWLEPVDVSGTPFAEYAFELPQGAELRRIEAATLDGKP LEVAKEGSLPADPWRHARAGCAYLVTTDLASFTVGALGAGGTVQVRASLIPSTRGTSVPDSVARLYHEAIRDGAKAELLA TAGTDYYRPDQAAVALALFSAAIDDATTDVWRSHTPSTPRGRAQWL >Mature_205_residues ASWDNWMPELVLAAPTAPAPLIHLCINRAARQFLRKTRAWQEWLEPVDVSGTPFAEYAFELPQGAELRRIEAATLDGKPL EVAKEGSLPADPWRHARAGCAYLVTTDLASFTVGALGAGGTVQVRASLIPSTRGTSVPDSVARLYHEAIRDGAKAELLAT AGTDYYRPDQAAVALALFSAAIDDATTDVWRSHTPSTPRGRAQWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22278; Mature: 22147
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASWDNWMPELVLAAPTAPAPLIHLCINRAARQFLRKTRAWQEWLEPVDVSGTPFAEYAF CCCCHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ELPQGAELRRIEAATLDGKPLEVAKEGSLPADPWRHARAGCAYLVTTDLASFTVGALGAG CCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHCCEEHHHHHHHHHHHHHHCCCC GTVQVRASLIPSTRGTSVPDSVARLYHEAIRDGAKAELLATAGTDYYRPDQAAVALALFS CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCHHHHHHHHHHH AAIDDATTDVWRSHTPSTPRGRAQWL HHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ASWDNWMPELVLAAPTAPAPLIHLCINRAARQFLRKTRAWQEWLEPVDVSGTPFAEYAF CCCHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ELPQGAELRRIEAATLDGKPLEVAKEGSLPADPWRHARAGCAYLVTTDLASFTVGALGAG CCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHCCEEHHHHHHHHHHHHHHCCCC GTVQVRASLIPSTRGTSVPDSVARLYHEAIRDGAKAELLATAGTDYYRPDQAAVALALFS CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCHHHHHHHHHHH AAIDDATTDVWRSHTPSTPRGRAQWL HHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA