Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611040
Identifier: 120611040
GI number: 120611040
Start: 2584192
End: 2584821
Strand: Direct
Name: 120611040
Synonym: Aave_2369
Alternate gene names: NA
Gene position: 2584192-2584821 (Clockwise)
Preceding gene: 120611039
Following gene: 120611041
Centisome position: 48.28
GC content: 69.84
Gene sequence:
>630_bases ATGGCTCTGAACGTAAAGCAGCTGCTGGACGACGTGGCGCGCGAACTGCAGGACAAGGGGAGCGTCCGCTGGACGCGAGC CGACCTGCTCGACTTCTTCAATGCGGCCCAGCGCGCGTTCGCCGAGTACCGGCCCGACCAGCTGGCGCAGGACCGCGAGC TGGTGCTGGCCGCCGGCTGGCAGCAGGAGCTACCGCCCGACGTGCTGACGCTCATCGACATCACCAACAACGCCAACACC GCGCAGCGCCGCATCACGAAGACCGCGCTGTGGACGCTGGACGCCGTGGCCGGTGCCTGGCGCTCGCAGACGCCCGCGCT GGAGGTGCAGCACTTCATGCACGACATGCGCACGCCGCGGGAGTACCTGGTATACCCGCCGGCCCGCGCGGGCGTGAAGG TGCGTGCGGTGGTGGCGCCTGCTGCCGTGGATCTGGCGGACGAGAGCGCCGCGCCATGGGTGCCGGCCCGCTGGCTGGAT GCGCTGCGCCACTTCATGCTGTTCCGGGCCTGGTCCGTGGATGGCGAATTTGCTGGCAACCAGGCGCTGGCCGCCTCGCA TCTGGAGCTGTTCCAGGGCGCGCTCGGCGTGCAGGTCAAGGCGTCCAACGAGGTGGCGCCGACCATGTGA
Upstream 100 bases:
>100_bases AGGCCGCCGTGGCGCTCGCGCTGTTCAGCGCCGCGATCGATGACGCAACCACCGACGTGTGGCGCTCGCACACGCCGAGC ACGCCGCGGGGGAGGGCGCA
Downstream 100 bases:
>100_bases CAAGCCTGCCATCCTGGCAGCACATTTTCGTAACCGGGGCGCTGGAGTGCTCGAAACCACAGGAGGCCTCCATGGCCGGT TTCTCCAACTCCCTCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MALNVKQLLDDVARELQDKGSVRWTRADLLDFFNAAQRAFAEYRPDQLAQDRELVLAAGWQQELPPDVLTLIDITNNANT AQRRITKTALWTLDAVAGAWRSQTPALEVQHFMHDMRTPREYLVYPPARAGVKVRAVVAPAAVDLADESAAPWVPARWLD ALRHFMLFRAWSVDGEFAGNQALAASHLELFQGALGVQVKASNEVAPTM
Sequences:
>Translated_209_residues MALNVKQLLDDVARELQDKGSVRWTRADLLDFFNAAQRAFAEYRPDQLAQDRELVLAAGWQQELPPDVLTLIDITNNANT AQRRITKTALWTLDAVAGAWRSQTPALEVQHFMHDMRTPREYLVYPPARAGVKVRAVVAPAAVDLADESAAPWVPARWLD ALRHFMLFRAWSVDGEFAGNQALAASHLELFQGALGVQVKASNEVAPTM >Mature_208_residues ALNVKQLLDDVARELQDKGSVRWTRADLLDFFNAAQRAFAEYRPDQLAQDRELVLAAGWQQELPPDVLTLIDITNNANTA QRRITKTALWTLDAVAGAWRSQTPALEVQHFMHDMRTPREYLVYPPARAGVKVRAVVAPAAVDLADESAAPWVPARWLDA LRHFMLFRAWSVDGEFAGNQALAASHLELFQGALGVQVKASNEVAPTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23272; Mature: 23140
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNVKQLLDDVARELQDKGSVRWTRADLLDFFNAAQRAFAEYRPDQLAQDRELVLAAGW CCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCC QQELPPDVLTLIDITNNANTAQRRITKTALWTLDAVAGAWRSQTPALEVQHFMHDMRTPR CCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH EYLVYPPARAGVKVRAVVAPAAVDLADESAAPWVPARWLDALRHFMLFRAWSVDGEFAGN HEEEECCCCCCEEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC QALAASHLELFQGALGVQVKASNEVAPTM HHHHHHHHHHHHHHHCEEEECCCCCCCCC >Mature Secondary Structure ALNVKQLLDDVARELQDKGSVRWTRADLLDFFNAAQRAFAEYRPDQLAQDRELVLAAGW CCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCC QQELPPDVLTLIDITNNANTAQRRITKTALWTLDAVAGAWRSQTPALEVQHFMHDMRTPR CCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH EYLVYPPARAGVKVRAVVAPAAVDLADESAAPWVPARWLDALRHFMLFRAWSVDGEFAGN HEEEECCCCCCEEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC QALAASHLELFQGALGVQVKASNEVAPTM HHHHHHHHHHHHHHHCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA