Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611038
Identifier: 120611038
GI number: 120611038
Start: 2583203
End: 2583574
Strand: Direct
Name: 120611038
Synonym: Aave_2367
Alternate gene names: NA
Gene position: 2583203-2583574 (Clockwise)
Preceding gene: 120611037
Following gene: 120611039
Centisome position: 48.26
GC content: 66.4
Gene sequence:
>372_bases ATGCTTCTTTTGACCGCGCTCCCCGCCCGCAAGACCGGCGAGCTGACCGTCCGCACGGACGACGGCACCGCGTACGTGTT CAAGGGCACCCCTCTGTCGTGCGAGGTCCAGGACGAGGATCACGTCGATGAGCTGCAGATCAAAGGCTTCCAGACCAAGG AAGAGTTCGACGCCGAGCAGAAATTCCAGCAGGTGGCCGCCAAGCGCGCGGAGCGCATTGCCGAACGCGAGGCGAAGAAG GCCCAAGCCGCCCAGGACGACGATGACGACGACGTGCCGGCCTCCACCGGCGACGGCCTACCCAAGGAAGACAACACCGC CCCCACGGGACGCGTGCGCAAGGCGGGTGCTGCCTCCCTGGTGAAGGGCTGA
Upstream 100 bases:
>100_bases TCTGGTGTACGCCAACGCCTGAATGTGCTGGCCCGCAAGGGTCTTTCCCACCCTGTCGGGTTCACGCCCGGCGGGGCCTT TTTGAACTCCGGAGAACCCC
Downstream 100 bases:
>100_bases CGCGCCATGGCATCGTGGGACAACTGGATGCCCGAGCTGGTGCTGGCTGCTCCCACGGCGCCCGCGCCGCTCATCCACCT GTGCATCAACCGGGCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLLLTALPARKTGELTVRTDDGTAYVFKGTPLSCEVQDEDHVDELQIKGFQTKEEFDAEQKFQQVAAKRAERIAEREAKK AQAAQDDDDDDVPASTGDGLPKEDNTAPTGRVRKAGAASLVKG
Sequences:
>Translated_123_residues MLLLTALPARKTGELTVRTDDGTAYVFKGTPLSCEVQDEDHVDELQIKGFQTKEEFDAEQKFQQVAAKRAERIAEREAKK AQAAQDDDDDDVPASTGDGLPKEDNTAPTGRVRKAGAASLVKG >Mature_123_residues MLLLTALPARKTGELTVRTDDGTAYVFKGTPLSCEVQDEDHVDELQIKGFQTKEEFDAEQKFQQVAAKRAERIAEREAKK AQAAQDDDDDDVPASTGDGLPKEDNTAPTGRVRKAGAASLVKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13333; Mature: 13333
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLTALPARKTGELTVRTDDGTAYVFKGTPLSCEVQDEDHVDELQIKGFQTKEEFDAEQ CEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCCCCCEEECCCCCHHHCCHHH KFQQVAAKRAERIAEREAKKAQAAQDDDDDDVPASTGDGLPKEDNTAPTGRVRKAGAASL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC VKG CCC >Mature Secondary Structure MLLLTALPARKTGELTVRTDDGTAYVFKGTPLSCEVQDEDHVDELQIKGFQTKEEFDAEQ CEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCCCCCEEECCCCCHHHCCHHH KFQQVAAKRAERIAEREAKKAQAAQDDDDDDVPASTGDGLPKEDNTAPTGRVRKAGAASL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC VKG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA