Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610970
Identifier: 120610970
GI number: 120610970
Start: 2525332
End: 2525769
Strand: Reverse
Name: 120610970
Synonym: Aave_2296
Alternate gene names: NA
Gene position: 2525769-2525332 (Counterclockwise)
Preceding gene: 120610973
Following gene: 120610969
Centisome position: 47.19
GC content: 44.98
Gene sequence:
>438_bases ATGGCATTCTCTCTGGAAGCAAATTCCAAAGAGGAATCACAAGCCATTCATCGACCGAACCAACGCAAGGCCGTCAAAGA ACTCACTCAAAACAGATGGACACTGAAACAGCTGCCAGACTGGATGAAGAGCGATGACTTCAGCCCGGAGAAAAATATCG AACTGGCATTCGAGGAGCCGGACATATTATTCGTGGTCAACTCATGCAATGGTATCAGCTTCAACTTCATTCCCAAGAAA AACAATCGGATCCGATTTCGTATGACAGGAGTCACGCTGATAGCTTGCAAACCAGAAATCATGAACCTGGAAGGCAACAT AATTCATTTCATTTCACAGGTTGACAGCTACAAGATCATTCGCGGCACCAATACCGAACTGATCCTGAAGAACAAACAAG GCGAAGAATTGCGATTCGAGCCCCAAACAATCGAATAA
Upstream 100 bases:
>100_bases GCCTTCCCTACCTGCAGCGGCTGAACCATTCATCATGAGAGACAGAAACAGATCGATAATCAAACCATCATTTTGCTTGA TGGTTTATTTAATTTTCTCC
Downstream 100 bases:
>100_bases ATCCGCGACGCGATTCATGGAGCATCGCCTCTGCTGGCGATGAACGCTGTCACAATACGCAGCCGAGCGCACTCTCGACA GACCGGCGATTGCTCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MAFSLEANSKEESQAIHRPNQRKAVKELTQNRWTLKQLPDWMKSDDFSPEKNIELAFEEPDILFVVNSCNGISFNFIPKK NNRIRFRMTGVTLIACKPEIMNLEGNIIHFISQVDSYKIIRGTNTELILKNKQGEELRFEPQTIE
Sequences:
>Translated_145_residues MAFSLEANSKEESQAIHRPNQRKAVKELTQNRWTLKQLPDWMKSDDFSPEKNIELAFEEPDILFVVNSCNGISFNFIPKK NNRIRFRMTGVTLIACKPEIMNLEGNIIHFISQVDSYKIIRGTNTELILKNKQGEELRFEPQTIE >Mature_144_residues AFSLEANSKEESQAIHRPNQRKAVKELTQNRWTLKQLPDWMKSDDFSPEKNIELAFEEPDILFVVNSCNGISFNFIPKKN NRIRFRMTGVTLIACKPEIMNLEGNIIHFISQVDSYKIIRGTNTELILKNKQGEELRFEPQTIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16885; Mature: 16753
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSLEANSKEESQAIHRPNQRKAVKELTQNRWTLKQLPDWMKSDDFSPEKNIELAFEEP CEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCEEEEEECC DILFVVNSCNGISFNFIPKKNNRIRFRMTGVTLIACKPEIMNLEGNIIHFISQVDSYKII CEEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCEECCCCCEEEEEHHCCCEEEE RGTNTELILKNKQGEELRFEPQTIE ECCCCEEEEECCCCCEEECCCCCCC >Mature Secondary Structure AFSLEANSKEESQAIHRPNQRKAVKELTQNRWTLKQLPDWMKSDDFSPEKNIELAFEEP EEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCEEEEEECC DILFVVNSCNGISFNFIPKKNNRIRFRMTGVTLIACKPEIMNLEGNIIHFISQVDSYKII CEEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCEECCCCCEEEEEHHCCCEEEE RGTNTELILKNKQGEELRFEPQTIE ECCCCEEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA