Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610969
Identifier: 120610969
GI number: 120610969
Start: 2524857
End: 2525183
Strand: Reverse
Name: 120610969
Synonym: Aave_2295
Alternate gene names: NA
Gene position: 2525183-2524857 (Counterclockwise)
Preceding gene: 120610970
Following gene: 120610966
Centisome position: 47.18
GC content: 69.72
Gene sequence:
>327_bases ATGCATTTTTCCGAGCGCCTGAAGCAACTCCCCTCCGTCGCCCACCTTTCCGCCCTGCATCTGCTGGCACCCGGCGGCGA GACCGTCGCCACGCTGGAGAACAAGCCTGGCCAGGCCGGCTCGCTGGCCGTGTACCACGCGCTGGGCCAGCTGTACGGCG GCCGCATCACGCCCGCCGCGGCCACGCTGGGACTGGAGTGGTATGCGGAGCACACGGCGGATGCCCAGGCGCATCCCGGC AAGCATCCCAACATCGACCGGCTGGTGGAGTGGGCGAAGGGCGACGTGGCCTATGGGGTGCGGCTGGTGCGCGCGGCTTC ATCCTGA
Upstream 100 bases:
>100_bases GTCACAATACGCAGCCGAGCGCACTCTCGACAGACCGGCGATTGCTCGCAGCCTCCATGCGGAAGGCCGCGCTTCCACGC AATTTTTCCAATTCACCACC
Downstream 100 bases:
>100_bases CGAAGCGGCCGGGGCAGCTGCCCTGCCCTCACTGTGTTCCCGAGGCGAGGCCGCTCGCTCTAGCTGATGGCTTCGTCAGA CAAACCTCTGTGGCATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MHFSERLKQLPSVAHLSALHLLAPGGETVATLENKPGQAGSLAVYHALGQLYGGRITPAAATLGLEWYAEHTADAQAHPG KHPNIDRLVEWAKGDVAYGVRLVRAASS
Sequences:
>Translated_108_residues MHFSERLKQLPSVAHLSALHLLAPGGETVATLENKPGQAGSLAVYHALGQLYGGRITPAAATLGLEWYAEHTADAQAHPG KHPNIDRLVEWAKGDVAYGVRLVRAASS >Mature_108_residues MHFSERLKQLPSVAHLSALHLLAPGGETVATLENKPGQAGSLAVYHALGQLYGGRITPAAATLGLEWYAEHTADAQAHPG KHPNIDRLVEWAKGDVAYGVRLVRAASS
Specific function: Unknown
COG id: COG4390
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11458; Mature: 11458
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFSERLKQLPSVAHLSALHLLAPGGETVATLENKPGQAGSLAVYHALGQLYGGRITPAA CCHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHH ATLGLEWYAEHTADAQAHPGKHPNIDRLVEWAKGDVAYGVRLVRAASS HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MHFSERLKQLPSVAHLSALHLLAPGGETVATLENKPGQAGSLAVYHALGQLYGGRITPAA CCHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHH ATLGLEWYAEHTADAQAHPGKHPNIDRLVEWAKGDVAYGVRLVRAASS HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA