Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610939
Identifier: 120610939
GI number: 120610939
Start: 2496748
End: 2497350
Strand: Direct
Name: 120610939
Synonym: Aave_2265
Alternate gene names: NA
Gene position: 2496748-2497350 (Clockwise)
Preceding gene: 120610938
Following gene: 120610940
Centisome position: 46.64
GC content: 44.44
Gene sequence:
>603_bases ATGAAGAGAGAAATATTCGTTGTGGGGGAGGATGAGCTATGTTGTTCTATTGCCGAAGTACTTGTTGATAAAACGGGCAA GGGGTTCAGAGTTTATCAGAGAACTGTCGCAGGGGGTGCTGGGCAATTTAAAAAAAAGATACCCGCGATGAATCAGGTGG CTTCCAATGTGATGCCGGTGCTGATGGTGGCAGATGCGGATCAGGCTCCTAGTCCTGCTGAGCAAATCAGGATGTGGCTA CCAGCCAAACCTAGTGATAGATTATGCTTGCGGTTGGCTGTGAGAGAAGCTGAAGCGTGGGTTCTGGCGGATAATGTGGG ATTTTCTGAGTTTGCTATGGTAAGTAAAGACATTTTTCCTATTAGTCCTGAAAATGAATTGGACCCAAAAGGAAAACTGC TTTCCATAATAAGAAGGAGTAAGCGCAGGGAGTTGAGGGAAGAAATGCTGCCTGCCAAAGGTTCAATGTCGGTTATTGGT CTTGGTTATAATATTCACATAGTCGATTTTGTTAAAAATTACTGGAATATCGATAGGGCGACCGCAAGGTCTCCAAGTCT GGGAAAAGCCTTTTTAAGGCTTAATTCAATGCTCGCGAAATAG
Upstream 100 bases:
>100_bases GTGCTACTGAAATTGATTTGATGAAGGCGGGGCTTTCTCCTGCGGATGTTATGCTTCCGAAAACTCATCCGGAAGGAATT GATCAAATTGGGCTGTTTTC
Downstream 100 bases:
>100_bases TTTGTATGCCCGCCGCCGCCCAGCTTCTCGCATTCCTGATCGCCGCCGTTCTCATCACCGCCACGCCCGGGCCGGACAAC CTCATGGTGCTGGGCATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKREIFVVGEDELCCSIAEVLVDKTGKGFRVYQRTVAGGAGQFKKKIPAMNQVASNVMPVLMVADADQAPSPAEQIRMWL PAKPSDRLCLRLAVREAEAWVLADNVGFSEFAMVSKDIFPISPENELDPKGKLLSIIRRSKRRELREEMLPAKGSMSVIG LGYNIHIVDFVKNYWNIDRATARSPSLGKAFLRLNSMLAK
Sequences:
>Translated_200_residues MKREIFVVGEDELCCSIAEVLVDKTGKGFRVYQRTVAGGAGQFKKKIPAMNQVASNVMPVLMVADADQAPSPAEQIRMWL PAKPSDRLCLRLAVREAEAWVLADNVGFSEFAMVSKDIFPISPENELDPKGKLLSIIRRSKRRELREEMLPAKGSMSVIG LGYNIHIVDFVKNYWNIDRATARSPSLGKAFLRLNSMLAK >Mature_200_residues MKREIFVVGEDELCCSIAEVLVDKTGKGFRVYQRTVAGGAGQFKKKIPAMNQVASNVMPVLMVADADQAPSPAEQIRMWL PAKPSDRLCLRLAVREAEAWVLADNVGFSEFAMVSKDIFPISPENELDPKGKLLSIIRRSKRRELREEMLPAKGSMSVIG LGYNIHIVDFVKNYWNIDRATARSPSLGKAFLRLNSMLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22296; Mature: 22296
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREIFVVGEDELCCSIAEVLVDKTGKGFRVYQRTVAGGAGQFKKKIPAMNQVASNVMPV CCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCEE LMVADADQAPSPAEQIRMWLPAKPSDRLCLRLAVREAEAWVLADNVGFSEFAMVSKDIFP EEEECCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCC ISPENELDPKGKLLSIIRRSKRRELREEMLPAKGSMSVIGLGYNIHIVDFVKNYWNIDRA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEHHHHHHHHHCCCHH TARSPSLGKAFLRLNSMLAK HCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKREIFVVGEDELCCSIAEVLVDKTGKGFRVYQRTVAGGAGQFKKKIPAMNQVASNVMPV CCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCEE LMVADADQAPSPAEQIRMWLPAKPSDRLCLRLAVREAEAWVLADNVGFSEFAMVSKDIFP EEEECCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCC ISPENELDPKGKLLSIIRRSKRRELREEMLPAKGSMSVIGLGYNIHIVDFVKNYWNIDRA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEHHHHHHHHHCCCHH TARSPSLGKAFLRLNSMLAK HCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA