Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610938
Identifier: 120610938
GI number: 120610938
Start: 2495594
End: 2496751
Strand: Direct
Name: 120610938
Synonym: Aave_2264
Alternate gene names: NA
Gene position: 2495594-2496751 (Clockwise)
Preceding gene: 120610936
Following gene: 120610939
Centisome position: 46.62
GC content: 46.2
Gene sequence:
>1158_bases ATGCTTATTACAAGATTGAAACTGAAAAATTGGCGGAATTTCAAAAATCTTGATATTCCTTTGAGAAGCCGTAGCTATAT TATTGGCGCCAATGCCTCTGGCAAATCTAACTTGTTGGATGTATTTAGGTTTTTGCGCGATATATGCAAACCTGCAGGCG GTGGGCTGCAGAAGGCTATTGAGGATAGGGGAGGGCTGACCAAGCTTCGGTGTCTGCAGGCGCGAACGGATAATGAGGTG GAGATCCACGTTGAAATCTCTGAAGATGCAGATTCGGATCCGGTGTGGATTTACACTCTTGCTTTCAAGCCTGAAGGTAC GGGCTTGCACAGGGTTCTTGTGACTCGCGAAATAGTTCGAAAGGCCGATAAGCCAACTCCGATTCTAAATCGTCCCGACC CAAAAGATAAAGCGGATACGCTTCGCAGAACTCAAACAGCGCTTGAACAAATTAATTCAAACTCGGATTTTCGTGAAATT GCTGATTTTTTTAGAGAGACCACCTATTTGCATCTTGTGCCTCAGTTGCTCAAGCATACAGAAATAGGTGCCCGCCTAGT TGAGGGGGATCCGTTTGGTCAAGGGCTTCTTCAACGTATTGCAAAAACACCCCAGAAAACTAGAGATGCTCGCCTTCGCC GTATACAGCAATCCCTTGAGAAGGCTGTTCCGCAGTTCAAGCAACTCAAATTTGAGCAAGACAAGATAACGGGTTTGCCT CATTTGATGGCTTCTTATCAGCACTGGCGCACTCATGGTGCTTGGCAGCGGGAAGATCAATTTTCCGATGGCACGCTTCG ATTGTTAGGCCTTTTGTGGATGCTGCAAGAAAGTAATTCGCTATTGCTGCTGGAAGAGCCCGAACTCTCGTTGAACGATG CGATTGTTGCTCACATTCCATTGATGATTGATCGAGTGTTGAGGAAGCAGAAGGCCTATGGTAGGCAGGTTATCGTTACA ACGCATAGTGAGGCGCTATTGGGCAATCCTCTTGATGGCGGTGCAATAATACTTTTGCAGCAAAATAGCGATGGTACTTT GGCTCGAATGCCAAGTGCTACTGAAATTGATTTGATGAAGGCGGGGCTTTCTCCTGCGGATGTTATGCTTCCGAAAACTC ATCCGGAAGGAATTGATCAAATTGGGCTGTTTTCATGA
Upstream 100 bases:
>100_bases GTGGAAAAATTAAGCGAACATTTCGAAGTTGCTGATCTTCTATGGTAATTTTGCTTGCTTTGGTGTAGATTGATCACTTT GCTCGGCTAACGGATGATTC
Downstream 100 bases:
>100_bases AGAGAGAAATATTCGTTGTGGGGGAGGATGAGCTATGTTGTTCTATTGCCGAAGTACTTGTTGATAAAACGGGCAAGGGG TTCAGAGTTTATCAGAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MLITRLKLKNWRNFKNLDIPLRSRSYIIGANASGKSNLLDVFRFLRDICKPAGGGLQKAIEDRGGLTKLRCLQARTDNEV EIHVEISEDADSDPVWIYTLAFKPEGTGLHRVLVTREIVRKADKPTPILNRPDPKDKADTLRRTQTALEQINSNSDFREI ADFFRETTYLHLVPQLLKHTEIGARLVEGDPFGQGLLQRIAKTPQKTRDARLRRIQQSLEKAVPQFKQLKFEQDKITGLP HLMASYQHWRTHGAWQREDQFSDGTLRLLGLLWMLQESNSLLLLEEPELSLNDAIVAHIPLMIDRVLRKQKAYGRQVIVT THSEALLGNPLDGGAIILLQQNSDGTLARMPSATEIDLMKAGLSPADVMLPKTHPEGIDQIGLFS
Sequences:
>Translated_385_residues MLITRLKLKNWRNFKNLDIPLRSRSYIIGANASGKSNLLDVFRFLRDICKPAGGGLQKAIEDRGGLTKLRCLQARTDNEV EIHVEISEDADSDPVWIYTLAFKPEGTGLHRVLVTREIVRKADKPTPILNRPDPKDKADTLRRTQTALEQINSNSDFREI ADFFRETTYLHLVPQLLKHTEIGARLVEGDPFGQGLLQRIAKTPQKTRDARLRRIQQSLEKAVPQFKQLKFEQDKITGLP HLMASYQHWRTHGAWQREDQFSDGTLRLLGLLWMLQESNSLLLLEEPELSLNDAIVAHIPLMIDRVLRKQKAYGRQVIVT THSEALLGNPLDGGAIILLQQNSDGTLARMPSATEIDLMKAGLSPADVMLPKTHPEGIDQIGLFS >Mature_385_residues MLITRLKLKNWRNFKNLDIPLRSRSYIIGANASGKSNLLDVFRFLRDICKPAGGGLQKAIEDRGGLTKLRCLQARTDNEV EIHVEISEDADSDPVWIYTLAFKPEGTGLHRVLVTREIVRKADKPTPILNRPDPKDKADTLRRTQTALEQINSNSDFREI ADFFRETTYLHLVPQLLKHTEIGARLVEGDPFGQGLLQRIAKTPQKTRDARLRRIQQSLEKAVPQFKQLKFEQDKITGLP HLMASYQHWRTHGAWQREDQFSDGTLRLLGLLWMLQESNSLLLLEEPELSLNDAIVAHIPLMIDRVLRKQKAYGRQVIVT THSEALLGNPLDGGAIILLQQNSDGTLARMPSATEIDLMKAGLSPADVMLPKTHPEGIDQIGLFS
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43533; Mature: 43533
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITRLKLKNWRNFKNLDIPLRSRSYIIGANASGKSNLLDVFRFLRDICKPAGGGLQKAI CEEEEEEHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH EDRGGLTKLRCLQARTDNEVEIHVEISEDADSDPVWIYTLAFKPEGTGLHRVLVTREIVR HHCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH KADKPTPILNRPDPKDKADTLRRTQTALEQINSNSDFREIADFFRETTYLHLVPQLLKHT HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EIGARLVEGDPFGQGLLQRIAKTPQKTRDARLRRIQQSLEKAVPQFKQLKFEQDKITGLP HHCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH HLMASYQHWRTHGAWQREDQFSDGTLRLLGLLWMLQESNSLLLLEEPELSLNDAIVAHIP HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH LMIDRVLRKQKAYGRQVIVTTHSEALLGNPLDGGAIILLQQNSDGTLARMPSATEIDLMK HHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCEEEEEEECCCCCEEECCCCCHHHHHH AGLSPADVMLPKTHPEGIDQIGLFS CCCCHHHEECCCCCCCCCCCCCCCC >Mature Secondary Structure MLITRLKLKNWRNFKNLDIPLRSRSYIIGANASGKSNLLDVFRFLRDICKPAGGGLQKAI CEEEEEEHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH EDRGGLTKLRCLQARTDNEVEIHVEISEDADSDPVWIYTLAFKPEGTGLHRVLVTREIVR HHCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH KADKPTPILNRPDPKDKADTLRRTQTALEQINSNSDFREIADFFRETTYLHLVPQLLKHT HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EIGARLVEGDPFGQGLLQRIAKTPQKTRDARLRRIQQSLEKAVPQFKQLKFEQDKITGLP HHCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH HLMASYQHWRTHGAWQREDQFSDGTLRLLGLLWMLQESNSLLLLEEPELSLNDAIVAHIP HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH LMIDRVLRKQKAYGRQVIVTTHSEALLGNPLDGGAIILLQQNSDGTLARMPSATEIDLMK HHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCEEEEEEECCCCCEEECCCCCHHHHHH AGLSPADVMLPKTHPEGIDQIGLFS CCCCHHHEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA