Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yrhP [H]

Identifier: 120610940

GI number: 120610940

Start: 2497356

End: 2497991

Strand: Direct

Name: yrhP [H]

Synonym: Aave_2266

Alternate gene names: 120610940

Gene position: 2497356-2497991 (Clockwise)

Preceding gene: 120610939

Following gene: 120610944

Centisome position: 46.66

GC content: 72.96

Gene sequence:

>636_bases
ATGCCCGCCGCCGCCCAGCTTCTCGCATTCCTGATCGCCGCCGTTCTCATCACCGCCACGCCCGGGCCGGACAACCTCAT
GGTGCTGGGCATGGGCATGTCGAGGGGCCGGGCGCGGGGCGTGGCCTTCGGGCTCGGCTGCGCCGCGGGCTGCCTGAGCC
ATACGCTGCTCGCGGTGCTCGGCGTGAGCGCGATGATCGCGGCCTCCCCCGTTGCGTTCACCGTGCTCAAGTGGGTGGGC
GGCGCCTACCTCGTGTGGCTCGGCGTGCAGGCCCTGCGCCACGCCGGCAGCGGCGGCACCGTGCGCACCGACGTGGCCGG
GCAGGCCGCCCAGCCGCTGCGCGTCCTGTTCGCCAGGGGCATGCTGGCGAATGCGGTCAATCCGAAGGTCGTGCTGTTCT
TCCTCTCGTTCCTGCCGCAGTTCGTGGTGCCCTCGCAGGGCGCGGTGGGGCTGCAGCTGGGCGTGCTGGGGCTGGTGTTC
ACGCTGCAGGCAGCGTTGCTCTTCGGCCTGCTGGGCTGCTTCGCGGGCACGATTGGCCACTGGCTGCAGCGGCGGCCGCG
CGCCGGCCTGTGGCTGGACCGCATCGCGGGCACGGTGTTCATCGCGCTGGGCCTGCGCATGGTGGCGGCGCGCTGA

Upstream 100 bases:

>100_bases
TTGTTAAAAATTACTGGAATATCGATAGGGCGACCGCAAGGTCTCCAAGTCTGGGAAAAGCCTTTTTAAGGCTTAATTCA
ATGCTCGCGAAATAGTTTGT

Downstream 100 bases:

>100_bases
ACGCGGGCGCCCCGCTCAGGCGCGCGGCAGCGTGATGGTGACGGAGGTGCCCTGGCCGGGGCGGCTTTCCATGCGCACCT
GGCCGCGGTTGGCTTCCACC

Product: lysine exporter protein LysE/YggA

Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPAAAQLLAFLIAAVLITATPGPDNLMVLGMGMSRGRARGVAFGLGCAAGCLSHTLLAVLGVSAMIAASPVAFTVLKWVG
GAYLVWLGVQALRHAGSGGTVRTDVAGQAAQPLRVLFARGMLANAVNPKVVLFFLSFLPQFVVPSQGAVGLQLGVLGLVF
TLQAALLFGLLGCFAGTIGHWLQRRPRAGLWLDRIAGTVFIALGLRMVAAR

Sequences:

>Translated_211_residues
MPAAAQLLAFLIAAVLITATPGPDNLMVLGMGMSRGRARGVAFGLGCAAGCLSHTLLAVLGVSAMIAASPVAFTVLKWVG
GAYLVWLGVQALRHAGSGGTVRTDVAGQAAQPLRVLFARGMLANAVNPKVVLFFLSFLPQFVVPSQGAVGLQLGVLGLVF
TLQAALLFGLLGCFAGTIGHWLQRRPRAGLWLDRIAGTVFIALGLRMVAAR
>Mature_210_residues
PAAAQLLAFLIAAVLITATPGPDNLMVLGMGMSRGRARGVAFGLGCAAGCLSHTLLAVLGVSAMIAASPVAFTVLKWVGG
AYLVWLGVQALRHAGSGGTVRTDVAGQAAQPLRVLFARGMLANAVNPKVVLFFLSFLPQFVVPSQGAVGLQLGVLGLVFT
LQAALLFGLLGCFAGTIGHWLQRRPRAGLWLDRIAGTVFIALGLRMVAAR

Specific function: Conducts The Efflux Of Homoserine And Homoserine Lactone. [C]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI48994979, Length=205, Percent_Identity=30.2439024390244, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788099, Length=201, Percent_Identity=23.8805970149254, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786522, Length=117, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI48994978, Length=212, Percent_Identity=26.8867924528302, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21787; Mature: 21655

Theoretical pI: Translated: 12.31; Mature: 12.31

Prosite motif: PS01076 ACETATE_KINASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAAQLLAFLIAAVLITATPGPDNLMVLGMGMSRGRARGVAFGLGCAAGCLSHTLLAVL
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GVSAMIAASPVAFTVLKWVGGAYLVWLGVQALRHAGSGGTVRTDVAGQAAQPLRVLFARG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHH
MLANAVNPKVVLFFLSFLPQFVVPSQGAVGLQLGVLGLVFTLQAALLFGLLGCFAGTIGH
HHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLQRRPRAGLWLDRIAGTVFIALGLRMVAAR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAAAQLLAFLIAAVLITATPGPDNLMVLGMGMSRGRARGVAFGLGCAAGCLSHTLLAVL
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GVSAMIAASPVAFTVLKWVGGAYLVWLGVQALRHAGSGGTVRTDVAGQAAQPLRVLFARG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHH
MLANAVNPKVVLFFLSFLPQFVVPSQGAVGLQLGVLGLVFTLQAALLFGLLGCFAGTIGH
HHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLQRRPRAGLWLDRIAGTVFIALGLRMVAAR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]