Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yvrE [H]
Identifier: 120610933
GI number: 120610933
Start: 2485814
End: 2486761
Strand: Direct
Name: yvrE [H]
Synonym: Aave_2259
Alternate gene names: 120610933
Gene position: 2485814-2486761 (Clockwise)
Preceding gene: 120610931
Following gene: 120610934
Centisome position: 46.44
GC content: 74.37
Gene sequence:
>948_bases ATGCCTTCCGGCACCCCGCCGGCCGTGTCCTGGCCCGCCCCCGCGACCGGCGCGGCGCGCTGCGTGCGGCCCATGGCCTC CCAGCTGGGCGAGGGCCTGCTGTGGTCGGAGCGCGAACAGGCGCTGTACTGGGTGGACATCCTCGCCCGCGAACTGCACC GCTGGGACCCCGCAGGCGGCGCGCACCGCTGCTGGACCTTCGAGGAGGAAATCTCCGCGCTGGCCGAGCGCGCCGCGGCG CCCGGCCTCCTCGTCACCCTGCGCCGCGGCTTCGCGCTGTTCGACCCGGCCGCCGACACCGCGCCGCGCTACCTGCACCA GCCCGAACCGGAGCGCGCCGGCAACCGCTTCAACGACGGCAAGTGCGATGCGCAGGGGCGCTTCTGGGCCGGATCGATGG ACTTCGGCTGCGAGGCACCCACCGGCGCGCTCTACCGCTTCGATCCCGATGGCCGCTGCACGCGGCACGACGACGGCTTC GCGGTGACCAATGGCCCGGCCTGGTCGCACGCCGGGGCTGCGGGCGGGACGCGGGCGCCGGCCATGTTCTTCAACGCCAC CGCCGAGGCCTGCACCTACCGCTACGACTTCGACCCCGGCACGGGAGCGCTGTCGAACCGGACGCTGTGGAAGCGCTGGT CCGCAGAAGACGGGCTGCCCGACGGCATGACCACCGATGCGCAGGGGCGGCTGTGGATCGCTCACTGGGGCGGCGCATGC GTGACCTGCCACGATCCCGCGAGCGCCGCCGAACTGTGCCGCGTCCCCCTGCCGGTGAGCCAGGTCACCACCTGCGCCTT CGGCGGCCCCGACCTGCGCACGCTCTTCATCATCTCCGCCCGCGTGGGCCTGTCGGATGCCCGGCTGGTGGCCGAGCCCC TGGCCGGATCGCTCTTCGCCGTCTCCGTGGACGGCCCCGGCCTGCCGGCCCATCGCTTCGGCGGCTGA
Upstream 100 bases:
>100_bases TACGTGCATCAATTTGCGTTGATAAGATCCGCCGCGTCAAGAGGCCCGCGACAGACGGGCGCTGAAACAACGTCTGGAGA CGCGCATGAATCCTCCCGAG
Downstream 100 bases:
>100_bases CCTCCTGGAGACGCCCCATGAACGAGACCTTCCATCCCGTCACCTGGCTGCACCATGCCGGCCAGCACCTGGGCCTCGTG CCGTCGCTGGGCGGCAGCGT
Product: gluconolactonase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPSGTPPAVSWPAPATGAARCVRPMASQLGEGLLWSEREQALYWVDILARELHRWDPAGGAHRCWTFEEEISALAERAAA PGLLVTLRRGFALFDPAADTAPRYLHQPEPERAGNRFNDGKCDAQGRFWAGSMDFGCEAPTGALYRFDPDGRCTRHDDGF AVTNGPAWSHAGAAGGTRAPAMFFNATAEACTYRYDFDPGTGALSNRTLWKRWSAEDGLPDGMTTDAQGRLWIAHWGGAC VTCHDPASAAELCRVPLPVSQVTTCAFGGPDLRTLFIISARVGLSDARLVAEPLAGSLFAVSVDGPGLPAHRFGG
Sequences:
>Translated_315_residues MPSGTPPAVSWPAPATGAARCVRPMASQLGEGLLWSEREQALYWVDILARELHRWDPAGGAHRCWTFEEEISALAERAAA PGLLVTLRRGFALFDPAADTAPRYLHQPEPERAGNRFNDGKCDAQGRFWAGSMDFGCEAPTGALYRFDPDGRCTRHDDGF AVTNGPAWSHAGAAGGTRAPAMFFNATAEACTYRYDFDPGTGALSNRTLWKRWSAEDGLPDGMTTDAQGRLWIAHWGGAC VTCHDPASAAELCRVPLPVSQVTTCAFGGPDLRTLFIISARVGLSDARLVAEPLAGSLFAVSVDGPGLPAHRFGG >Mature_314_residues PSGTPPAVSWPAPATGAARCVRPMASQLGEGLLWSEREQALYWVDILARELHRWDPAGGAHRCWTFEEEISALAERAAAP GLLVTLRRGFALFDPAADTAPRYLHQPEPERAGNRFNDGKCDAQGRFWAGSMDFGCEAPTGALYRFDPDGRCTRHDDGFA VTNGPAWSHAGAAGGTRAPAMFFNATAEACTYRYDFDPGTGALSNRTLWKRWSAEDGLPDGMTTDAQGRLWIAHWGGACV TCHDPASAAELCRVPLPVSQVTTCAFGGPDLRTLFIISARVGLSDARLVAEPLAGSLFAVSVDGPGLPAHRFGG
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SMP-30/CGR1 family [H]
Homologues:
Organism=Homo sapiens, GI23111021, Length=302, Percent_Identity=30.4635761589404, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI4759036, Length=302, Percent_Identity=30.4635761589404, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI45551448, Length=270, Percent_Identity=30.7407407407407, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24641471, Length=270, Percent_Identity=30.7407407407407, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI18860103, Length=270, Percent_Identity=30.7407407407407, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24641469, Length=270, Percent_Identity=30.7407407407407, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24646912, Length=267, Percent_Identity=29.2134831460674, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI24646910, Length=267, Percent_Identity=29.2134831460674, Blast_Score=114, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: NA
Molecular weight: Translated: 33701; Mature: 33570
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGTPPAVSWPAPATGAARCVRPMASQLGEGLLWSEREQALYWVDILARELHRWDPAGG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AHRCWTFEEEISALAERAAAPGLLVTLRRGFALFDPAADTAPRYLHQPEPERAGNRFNDG CCEEEEHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHCCCCHHHHCCCCCCC KCDAQGRFWAGSMDFGCEAPTGALYRFDPDGRCTRHDDGFAVTNGPAWSHAGAAGGTRAP CCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCEECCCCEEEECCCCCCCCCCCCCCCCC AMFFNATAEACTYRYDFDPGTGALSNRTLWKRWSAEDGLPDGMTTDAQGRLWIAHWGGAC EEEEECCHHHEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEE VTCHDPASAAELCRVPLPVSQVTTCAFGGPDLRTLFIISARVGLSDARLVAEPLAGSLFA EEECCCCCHHHHHCCCCCHHHHHEEECCCCCCEEEEEEEECCCCCHHHHHHHCCCCCEEE VSVDGPGLPAHRFGG EEECCCCCCCCCCCC >Mature Secondary Structure PSGTPPAVSWPAPATGAARCVRPMASQLGEGLLWSEREQALYWVDILARELHRWDPAGG CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AHRCWTFEEEISALAERAAAPGLLVTLRRGFALFDPAADTAPRYLHQPEPERAGNRFNDG CCEEEEHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHCCCCHHHHCCCCCCC KCDAQGRFWAGSMDFGCEAPTGALYRFDPDGRCTRHDDGFAVTNGPAWSHAGAAGGTRAP CCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCEECCCCEEEECCCCCCCCCCCCCCCCC AMFFNATAEACTYRYDFDPGTGALSNRTLWKRWSAEDGLPDGMTTDAQGRLWIAHWGGAC EEEEECCHHHEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEE VTCHDPASAAELCRVPLPVSQVTTCAFGGPDLRTLFIISARVGLSDARLVAEPLAGSLFA EEECCCCCHHHHHCCCCCHHHHHEEECCCCCCEEEEEEEECCCCCHHHHHHHCCCCCEEE VSVDGPGLPAHRFGG EEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]