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The map label for this gene is yphB [H]

Identifier: 120610934

GI number: 120610934

Start: 2486779

End: 2487849

Strand: Direct

Name: yphB [H]

Synonym: Aave_2260

Alternate gene names: 120610934

Gene position: 2486779-2487849 (Clockwise)

Preceding gene: 120610933

Following gene: 120610936

Centisome position: 46.46

GC content: 73.58

Gene sequence:

>1071_bases
ATGAACGAGACCTTCCATCCCGTCACCTGGCTGCACCATGCCGGCCAGCACCTGGGCCTCGTGCCGTCGCTGGGCGGCAG
CGTGGCGGCCTGGCAGATCGACGGCCCCGACGGCCGCCGCGCCGACCTGTGGCGCTGCTGGGACGGCCGCACGGCCGATC
TCTACCGCATGGCCTCGTTCGCCATGGTGCCCTGGTCCAACCGCATCAGCTGCGGCGGGTTCTTCCATGCGGGGCGCTTC
CGTCCGATGCAGCCCAACCGCGCGGGCGAGCCGTACCCCATCCACGGCGACGGCTGGCTGCAGCCCTGGAGCCTGCACCA
GCCGGCTCCGGACACCCTGGAGATGGCCCTGCACTCGGACCGCTTCCAGGGCAACCCCTACCACTACGAATGCGTGCAGA
CCTTCCGCCTGGTGCCGGGCGGGCTGGACCAGAGCGTGGTGGTGCGCCACCTGGGCTCCGAGCCGCTGCCCTACGGGCTG
GGCCTGCATCCCTGGTTCCCGCGCACGCCGGACACGCGCATCTCCGCTCCCGTGCAGGGCGTGTGGCTCAGCGGCAGCGA
TCCGCTGCCCACGCGCCACACCGAGTGGTTCCCCGAGGGCTGGAACCTCAACGGCGGCATATCGGCCCACGGCGGCCTGA
TCGACAACGCCTACACCGGATGGGGCGGCACGGCGCGCATCGCCTGGCCCGAGCGCGGCCTGCAGCTCACGGCGCGCATG
CCGGACTTCGTGCAGGACGGCGGGGTCGGGCGCCACTTCTGCCTGGTGTACCGGCCGCCCGAAGGACCGGCCTTCTGCTT
CGAGCCCATCACCCAGCCCATCGACGCCTTCCACCAGCCGGGGCAGCCGGGCCTGCGCGTGCTGGAGCGCGGGCAGGAGT
TCGCGCTGCGCGTGCAATGGCGCTACGGCCTGCTCGATGATGCGCTGGCTGGAGGCGCCCCGCCGTCCGGCCGCGCGGCG
GCGCCCGTGGCGGGGCCCTTTGCGGGGGCAGGGGCGGGGGCCGGGGGCCGCAGCGGCGACCCGGGGGCGGTACGGAAAGA
GTCCAGGCTCGCTTCCGACGCCGAGGCATAG

Upstream 100 bases:

>100_bases
TGGTGGCCGAGCCCCTGGCCGGATCGCTCTTCGCCGTCTCCGTGGACGGCCCCGGCCTGCCGGCCCATCGCTTCGGCGGC
TGACCTCCTGGAGACGCCCC

Downstream 100 bases:

>100_bases
CGGCTGCTGCCGGCTTCGGCGCCCGCCGCAGCACGGTCCGCCGCGCCGCTCTCCTGGCCCTGCGCTCCCGGTTCCCAGGT
TCTCGTGGCCTGGATGCGCT

Product: aldose 1-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MNETFHPVTWLHHAGQHLGLVPSLGGSVAAWQIDGPDGRRADLWRCWDGRTADLYRMASFAMVPWSNRISCGGFFHAGRF
RPMQPNRAGEPYPIHGDGWLQPWSLHQPAPDTLEMALHSDRFQGNPYHYECVQTFRLVPGGLDQSVVVRHLGSEPLPYGL
GLHPWFPRTPDTRISAPVQGVWLSGSDPLPTRHTEWFPEGWNLNGGISAHGGLIDNAYTGWGGTARIAWPERGLQLTARM
PDFVQDGGVGRHFCLVYRPPEGPAFCFEPITQPIDAFHQPGQPGLRVLERGQEFALRVQWRYGLLDDALAGGAPPSGRAA
APVAGPFAGAGAGAGGRSGDPGAVRKESRLASDAEA

Sequences:

>Translated_356_residues
MNETFHPVTWLHHAGQHLGLVPSLGGSVAAWQIDGPDGRRADLWRCWDGRTADLYRMASFAMVPWSNRISCGGFFHAGRF
RPMQPNRAGEPYPIHGDGWLQPWSLHQPAPDTLEMALHSDRFQGNPYHYECVQTFRLVPGGLDQSVVVRHLGSEPLPYGL
GLHPWFPRTPDTRISAPVQGVWLSGSDPLPTRHTEWFPEGWNLNGGISAHGGLIDNAYTGWGGTARIAWPERGLQLTARM
PDFVQDGGVGRHFCLVYRPPEGPAFCFEPITQPIDAFHQPGQPGLRVLERGQEFALRVQWRYGLLDDALAGGAPPSGRAA
APVAGPFAGAGAGAGGRSGDPGAVRKESRLASDAEA
>Mature_356_residues
MNETFHPVTWLHHAGQHLGLVPSLGGSVAAWQIDGPDGRRADLWRCWDGRTADLYRMASFAMVPWSNRISCGGFFHAGRF
RPMQPNRAGEPYPIHGDGWLQPWSLHQPAPDTLEMALHSDRFQGNPYHYECVQTFRLVPGGLDQSVVVRHLGSEPLPYGL
GLHPWFPRTPDTRISAPVQGVWLSGSDPLPTRHTEWFPEGWNLNGGISAHGGLIDNAYTGWGGTARIAWPERGLQLTARM
PDFVQDGGVGRHFCLVYRPPEGPAFCFEPITQPIDAFHQPGQPGLRVLERGQEFALRVQWRYGLLDDALAGGAPPSGRAA
APVAGPFAGAGAGAGGRSGDPGAVRKESRLASDAEA

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=254, Percent_Identity=30.7086614173228, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 38762; Mature: 38762

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETFHPVTWLHHAGQHLGLVPSLGGSVAAWQIDGPDGRRADLWRCWDGRTADLYRMASF
CCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHE
AMVPWSNRISCGGFFHAGRFRPMQPNRAGEPYPIHGDGWLQPWSLHQPAPDTLEMALHSD
EECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHC
RFQGNPYHYECVQTFRLVPGGLDQSVVVRHLGSEPLPYGLGLHPWFPRTPDTRISAPVQG
CCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEE
VWLSGSDPLPTRHTEWFPEGWNLNGGISAHGGLIDNAYTGWGGTARIAWPERGLQLTARM
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECC
PDFVQDGGVGRHFCLVYRPPEGPAFCFEPITQPIDAFHQPGQPGLRVLERGQEFALRVQW
CHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEE
RYGLLDDALAGGAPPSGRAAAPVAGPFAGAGAGAGGRSGDPGAVRKESRLASDAEA
ECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MNETFHPVTWLHHAGQHLGLVPSLGGSVAAWQIDGPDGRRADLWRCWDGRTADLYRMASF
CCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHE
AMVPWSNRISCGGFFHAGRFRPMQPNRAGEPYPIHGDGWLQPWSLHQPAPDTLEMALHSD
EECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHC
RFQGNPYHYECVQTFRLVPGGLDQSVVVRHLGSEPLPYGLGLHPWFPRTPDTRISAPVQG
CCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEE
VWLSGSDPLPTRHTEWFPEGWNLNGGISAHGGLIDNAYTGWGGTARIAWPERGLQLTARM
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECC
PDFVQDGGVGRHFCLVYRPPEGPAFCFEPITQPIDAFHQPGQPGLRVLERGQEFALRVQW
CHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEE
RYGLLDDALAGGAPPSGRAAAPVAGPFAGAGAGAGGRSGDPGAVRKESRLASDAEA
ECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]