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The map label for this gene is avrA [H]

Identifier: 120610848

GI number: 120610848

Start: 2390974

End: 2392260

Strand: Direct

Name: avrA [H]

Synonym: Aave_2174

Alternate gene names: 120610848

Gene position: 2390974-2392260 (Clockwise)

Preceding gene: 120610847

Following gene: 120610850

Centisome position: 44.67

GC content: 63.56

Gene sequence:

>1287_bases
ATGTTGCCTGAATCCATCCCGCGTCCATACGGATCGAACGCCGCCCCCGCCGCCTCTTCCTTGATTGCCCGATCTGCGCA
AGACCTTCAGGCTGGTACCAGCCAGCACGTGGCCGCAGAGGCAACTCCAAGGCCGCGACCGGCTCTATTGGCACCGGAAG
GGCTGGCTTCCCGCCCGCGCCCGGCTGGCCAGGCACCGGGATCCGCATCCAGCGGGCCCGCCAGCTTCAGCCAAGCCCAT
GTGGCTGGCCGGTGCCGCGAGATGGACATGGATGCCTCTTCGGCAATCCGGCAATTTCTCTCCCAATCCCTGTCCAACAA
CCGGTATGTCTCCGAAGAACACCTGCGGGCGCGCGCAGAAAATTATCTTGCCTATATCGACGCCGAGAAAGCACTGATAG
ACCGGGCAGACGTTTCTTTGCAGAACGTACTGTCCGCGGTATCCAGGCAATCCGCCTGGATGTGCCATCTGGAGCGCGGG
GTCTGGCGTGCAGAGACTGCTTTGCAGGACACGAACACGGACAGGGAGCGTCTGGCGGCTGAAGCCGAAGGCTCCATGGT
GCCTGCACCGTCTTCGCCCTATGCCCGTCCTCGTGCCTGGACGGTGTCGCCGACGGCTGCCTCGGCCCTTGCCATGATGA
TTCGGGGCGAGGAAGGCCCCTTCACCAGGGAGCAATCGAAAACCGGCTTCGAGACGCTGCAGGAGTCTCTTCTGCTGGCA
TCACGCTTGAAGATCGGGGCGCGGAAATCCCATCGTTCTGCCCACCGCCACGATGCGAAGCGCAGCGAGACCCATCCCAC
GAAAACGCCAGGGGGCACCGATTTGTCCCGTGACCCAGGCTCTCGCTTGAGGGATGAGGCCGGCATTCCCGTGATGACTG
GAACTTCCGGCTCGTCGTCCGACGTCGCTCTGACCACCCTTTATGCCGCCGACCGGGCCAAGTTGCCCTGGATGGCGCCC
GGGTTGGATTCGCAAGCTGGAATGGATGCGATGGTCGATCTGTCCCTGCAGTTCTTCCGGACCGAAGGGTCGAGTCCATC
GGTGACCATGGCTCGCGGTATGAACCGGGTGCGGTCCGGTGCAGGCCTGCCGCCGAAGGAGGTGGATGCGCACCAGGTCT
TTTCCCACAGTTATGCGGAGATTGACGCCGGAGTCCGCTTGACGCTCGAAGGAGTCGATCCGGCGGACGAAGGGGCCGTC
GAGCAGTCGCTGGGCCGGCTGACTTCGGAGGCGAAGGCTCGCCTCGATCTCGTACGCAAAGAGCTACTGCTGAGCCCCGT
CTCCTGA

Upstream 100 bases:

>100_bases
CAGGACCAGGGAAGCAGAATCCGAACGCTCGGTAGCCAGGATTTTTCGGCTGAAGACATCTTGCAAGGTCTGCGTTTGTT
CCTTTCCTCCAAGGTGCAGC

Downstream 100 bases:

>100_bases
CATCGGGACTGGCTACTCCTGATAGGTTGACCTGCAGCGCTGGCCGGCGGTCAGTCCCGTTCGATAGGAGTGGCCGCTTC
TTCGCCGGGTGGCATTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MLPESIPRPYGSNAAPAASSLIARSAQDLQAGTSQHVAAEATPRPRPALLAPEGLASRPRPAGQAPGSASSGPASFSQAH
VAGRCREMDMDASSAIRQFLSQSLSNNRYVSEEHLRARAENYLAYIDAEKALIDRADVSLQNVLSAVSRQSAWMCHLERG
VWRAETALQDTNTDRERLAAEAEGSMVPAPSSPYARPRAWTVSPTAASALAMMIRGEEGPFTREQSKTGFETLQESLLLA
SRLKIGARKSHRSAHRHDAKRSETHPTKTPGGTDLSRDPGSRLRDEAGIPVMTGTSGSSSDVALTTLYAADRAKLPWMAP
GLDSQAGMDAMVDLSLQFFRTEGSSPSVTMARGMNRVRSGAGLPPKEVDAHQVFSHSYAEIDAGVRLTLEGVDPADEGAV
EQSLGRLTSEAKARLDLVRKELLLSPVS

Sequences:

>Translated_428_residues
MLPESIPRPYGSNAAPAASSLIARSAQDLQAGTSQHVAAEATPRPRPALLAPEGLASRPRPAGQAPGSASSGPASFSQAH
VAGRCREMDMDASSAIRQFLSQSLSNNRYVSEEHLRARAENYLAYIDAEKALIDRADVSLQNVLSAVSRQSAWMCHLERG
VWRAETALQDTNTDRERLAAEAEGSMVPAPSSPYARPRAWTVSPTAASALAMMIRGEEGPFTREQSKTGFETLQESLLLA
SRLKIGARKSHRSAHRHDAKRSETHPTKTPGGTDLSRDPGSRLRDEAGIPVMTGTSGSSSDVALTTLYAADRAKLPWMAP
GLDSQAGMDAMVDLSLQFFRTEGSSPSVTMARGMNRVRSGAGLPPKEVDAHQVFSHSYAEIDAGVRLTLEGVDPADEGAV
EQSLGRLTSEAKARLDLVRKELLLSPVS
>Mature_428_residues
MLPESIPRPYGSNAAPAASSLIARSAQDLQAGTSQHVAAEATPRPRPALLAPEGLASRPRPAGQAPGSASSGPASFSQAH
VAGRCREMDMDASSAIRQFLSQSLSNNRYVSEEHLRARAENYLAYIDAEKALIDRADVSLQNVLSAVSRQSAWMCHLERG
VWRAETALQDTNTDRERLAAEAEGSMVPAPSSPYARPRAWTVSPTAASALAMMIRGEEGPFTREQSKTGFETLQESLLLA
SRLKIGARKSHRSAHRHDAKRSETHPTKTPGGTDLSRDPGSRLRDEAGIPVMTGTSGSSSDVALTTLYAADRAKLPWMAP
GLDSQAGMDAMVDLSLQFFRTEGSSPSVTMARGMNRVRSGAGLPPKEVDAHQVFSHSYAEIDAGVRLTLEGVDPADEGAV
EQSLGRLTSEAKARLDLVRKELLLSPVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45758; Mature: 45758

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPESIPRPYGSNAAPAASSLIARSAQDLQAGTSQHVAAEATPRPRPALLAPEGLASRPR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEECCCCCCCCCC
PAGQAPGSASSGPASFSQAHVAGRCREMDMDASSAIRQFLSQSLSNNRYVSEEHLRARAE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
NYLAYIDAEKALIDRADVSLQNVLSAVSRQSAWMCHLERGVWRAETALQDTNTDRERLAA
HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
EAEGSMVPAPSSPYARPRAWTVSPTAASALAMMIRGEEGPFTREQSKTGFETLQESLLLA
HHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SRLKIGARKSHRSAHRHDAKRSETHPTKTPGGTDLSRDPGSRLRDEAGIPVMTGTSGSSS
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCC
DVALTTLYAADRAKLPWMAPGLDSQAGMDAMVDLSLQFFRTEGSSPSVTMARGMNRVRSG
CEEEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHC
AGLPPKEVDAHQVFSHSYAEIDAGVRLTLEGVDPADEGAVEQSLGRLTSEAKARLDLVRK
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELLLSPVS
HHHHCCCC
>Mature Secondary Structure
MLPESIPRPYGSNAAPAASSLIARSAQDLQAGTSQHVAAEATPRPRPALLAPEGLASRPR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEECCCCCCCCCC
PAGQAPGSASSGPASFSQAHVAGRCREMDMDASSAIRQFLSQSLSNNRYVSEEHLRARAE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
NYLAYIDAEKALIDRADVSLQNVLSAVSRQSAWMCHLERGVWRAETALQDTNTDRERLAA
HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
EAEGSMVPAPSSPYARPRAWTVSPTAASALAMMIRGEEGPFTREQSKTGFETLQESLLLA
HHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SRLKIGARKSHRSAHRHDAKRSETHPTKTPGGTDLSRDPGSRLRDEAGIPVMTGTSGSSS
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCC
DVALTTLYAADRAKLPWMAPGLDSQAGMDAMVDLSLQFFRTEGSSPSVTMARGMNRVRSG
CEEEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHC
AGLPPKEVDAHQVFSHSYAEIDAGVRLTLEGVDPADEGAVEQSLGRLTSEAKARLDLVRK
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELLLSPVS
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3027035 [H]