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The map label for this gene is avrA [H]

Identifier: 120610847

GI number: 120610847

Start: 2389863

End: 2390984

Strand: Direct

Name: avrA [H]

Synonym: Aave_2173

Alternate gene names: 120610847

Gene position: 2389863-2390984 (Clockwise)

Preceding gene: 120610846

Following gene: 120610848

Centisome position: 44.65

GC content: 59.71

Gene sequence:

>1122_bases
ATGCTGGAGAAAAAGAGGCAGGTGCAGGATGTGGCGCGAATCTACAGTAAAGCCAGCACTGCGGCCGCGCAGGGTGTGTC
GGTCCATCGCGCTGCAGATCCGGTATTGCCCCGCGTGACACGCGGGGCAGAGATGTTGCAGGAGCGTTTTGCCAATGGCG
AAGCGGCAATGATTCGCACGCTGCGGTTCTCTTGCGATCAGGAGGCCGCCGAGCATTTCGGGGGATCGGGAAAGACGCCC
GCCAAGCGAGAAGTCGATACCCTGGCGAATCGGGTGCTGGAGCGGGACATCGTCATGACCCCATCGTGCGTGATTGCCCC
AGACGCCCAAGGCAGCATGGTGTCCATCATGGAAAGGCGACACCGTCCCAAATGGAAAGGTCTGCCATCGCTCGTGTACC
TTCCGGAGCAGGCGTCCTGGGGTTCGCACCATCCTCAACTGCATCGACGCACGGGTTTTGGCGACATCCATTCCTTTTCT
TCCAACAAGGGATTCGACGAGGAATACGCCAAAGCCGCACCTCAACTGAGCCAGGCAGCACGGCTGGAGATGTTGGAGCG
CAAATCCCGCCCCTTCATGAAGCAGATCCCGGACAGGCCTTCGGAGGGGTTTTCGCATTCACCCCAGGAACTGGCAAGGG
AAATGCGCATGCTGCAGGCCGGGCGGCCCGGAGAAATCCTGCACCACAATGAGTATTGCGCCAAGCTCGAGTTATGGGAC
GCCCGTGCGCTGGAAGCTGGCGCGTCTCCAGCTGTCGCCATTGCCACGATGGTGGAGTTCAACCTGGAGATGTCTGCCAT
GGCGCGCGAACTCGAAAGCGAAGGTATCGACGGACACGCGCTGAACGCCTTTCTTGCCCGCCAGATGTCCTGGTCGCCGG
ACGGGGCCGTGCGCGATCTGGATTCCACGCTGGAGAGTCTTCAGGACATTGATGCGCGAGAGCGGCAGCAGATCCTGGAA
GGCATATGCGAGCAGCTTCGCGAGGGTATTTCCCTGTGCACATACAGGTTCCAGGACCAGGGAAGCAGAATCCGAACGCT
CGGTAGCCAGGATTTTTCGGCTGAAGACATCTTGCAAGGTCTGCGTTTGTTCCTTTCCTCCAAGGTGCAGCATGTTGCCT
GA

Upstream 100 bases:

>100_bases
TCGCGAAGCACCAGAGACGTTGCCCACACATCCGCACCTTCGTGCACGCGGCAGGGCGTGCAATCGGCTGGCCCCGAGAG
CGCGTATCCAGCTGGAGCAG

Downstream 100 bases:

>100_bases
ATCCATCCCGCGTCCATACGGATCGAACGCCGCCCCCGCCGCCTCTTCCTTGATTGCCCGATCTGCGCAAGACCTTCAGG
CTGGTACCAGCCAGCACGTG

Product: avirulence protein AvrBs1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MLEKKRQVQDVARIYSKASTAAAQGVSVHRAADPVLPRVTRGAEMLQERFANGEAAMIRTLRFSCDQEAAEHFGGSGKTP
AKREVDTLANRVLERDIVMTPSCVIAPDAQGSMVSIMERRHRPKWKGLPSLVYLPEQASWGSHHPQLHRRTGFGDIHSFS
SNKGFDEEYAKAAPQLSQAARLEMLERKSRPFMKQIPDRPSEGFSHSPQELAREMRMLQAGRPGEILHHNEYCAKLELWD
ARALEAGASPAVAIATMVEFNLEMSAMARELESEGIDGHALNAFLARQMSWSPDGAVRDLDSTLESLQDIDARERQQILE
GICEQLREGISLCTYRFQDQGSRIRTLGSQDFSAEDILQGLRLFLSSKVQHVA

Sequences:

>Translated_373_residues
MLEKKRQVQDVARIYSKASTAAAQGVSVHRAADPVLPRVTRGAEMLQERFANGEAAMIRTLRFSCDQEAAEHFGGSGKTP
AKREVDTLANRVLERDIVMTPSCVIAPDAQGSMVSIMERRHRPKWKGLPSLVYLPEQASWGSHHPQLHRRTGFGDIHSFS
SNKGFDEEYAKAAPQLSQAARLEMLERKSRPFMKQIPDRPSEGFSHSPQELAREMRMLQAGRPGEILHHNEYCAKLELWD
ARALEAGASPAVAIATMVEFNLEMSAMARELESEGIDGHALNAFLARQMSWSPDGAVRDLDSTLESLQDIDARERQQILE
GICEQLREGISLCTYRFQDQGSRIRTLGSQDFSAEDILQGLRLFLSSKVQHVA
>Mature_373_residues
MLEKKRQVQDVARIYSKASTAAAQGVSVHRAADPVLPRVTRGAEMLQERFANGEAAMIRTLRFSCDQEAAEHFGGSGKTP
AKREVDTLANRVLERDIVMTPSCVIAPDAQGSMVSIMERRHRPKWKGLPSLVYLPEQASWGSHHPQLHRRTGFGDIHSFS
SNKGFDEEYAKAAPQLSQAARLEMLERKSRPFMKQIPDRPSEGFSHSPQELAREMRMLQAGRPGEILHHNEYCAKLELWD
ARALEAGASPAVAIATMVEFNLEMSAMARELESEGIDGHALNAFLARQMSWSPDGAVRDLDSTLESLQDIDARERQQILE
GICEQLREGISLCTYRFQDQGSRIRTLGSQDFSAEDILQGLRLFLSSKVQHVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41665; Mature: 41665

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKKRQVQDVARIYSKASTAAAQGVSVHRAADPVLPRVTRGAEMLQERFANGEAAMIRT
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
LRFSCDQEAAEHFGGSGKTPAKREVDTLANRVLERDIVMTPSCVIAPDAQGSMVSIMERR
HHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEECCCCCCHHHHHHHHH
HRPKWKGLPSLVYLPEQASWGSHHPQLHRRTGFGDIHSFSSNKGFDEEYAKAAPQLSQAA
CCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH
RLEMLERKSRPFMKQIPDRPSEGFSHSPQELAREMRMLQAGRPGEILHHNEYCAKLELWD
HHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHH
ARALEAGASPAVAIATMVEFNLEMSAMARELESEGIDGHALNAFLARQMSWSPDGAVRDL
HHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHH
DSTLESLQDIDARERQQILEGICEQLREGISLCTYRFQDQGSRIRTLGSQDFSAEDILQG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHH
LRLFLSSKVQHVA
HHHHHHHHHHHCC
>Mature Secondary Structure
MLEKKRQVQDVARIYSKASTAAAQGVSVHRAADPVLPRVTRGAEMLQERFANGEAAMIRT
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
LRFSCDQEAAEHFGGSGKTPAKREVDTLANRVLERDIVMTPSCVIAPDAQGSMVSIMERR
HHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEECCCCCCHHHHHHHHH
HRPKWKGLPSLVYLPEQASWGSHHPQLHRRTGFGDIHSFSSNKGFDEEYAKAAPQLSQAA
CCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH
RLEMLERKSRPFMKQIPDRPSEGFSHSPQELAREMRMLQAGRPGEILHHNEYCAKLELWD
HHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHH
ARALEAGASPAVAIATMVEFNLEMSAMARELESEGIDGHALNAFLARQMSWSPDGAVRDL
HHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHH
DSTLESLQDIDARERQQILEGICEQLREGISLCTYRFQDQGSRIRTLGSQDFSAEDILQG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHH
LRLFLSSKVQHVA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3027035 [H]