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The map label for this gene is 120610850

Identifier: 120610850

GI number: 120610850

Start: 2392968

End: 2394086

Strand: Direct

Name: 120610850

Synonym: Aave_2176

Alternate gene names: NA

Gene position: 2392968-2394086 (Clockwise)

Preceding gene: 120610848

Following gene: 120610852

Centisome position: 44.71

GC content: 71.4

Gene sequence:

>1119_bases
ATGACCGAAGTCCACATCCCCCTGCAGAGCATCAAGGGCCGAGGCACGGCGGCACGTACGCCCCACCGCTTCGCGCGCGA
CGCGCGCTCGGCGTTCGACGACGGCTGGGGCGGTCCCGCGGCCCAGGAAGGCGAGGGCGGCGCCGCGGCACCGCCTTCCA
CCGAGGTCATCCTGGAAACCGCGCGCAGCGCGATCTGCGCCAACGATTCGCCCGACATCTTCTTCGACCATTCCGTCAAT
CCTTACCGCGGCTGCGAGCACGGCTGCGTCTATTGCTACGCGCGGCCCACGCACAGCTACCTCAACCTGTCGCCCGGGCT
GGATTTCGAGACCCGCATCATCGCCAAGCACAACATCGCCGAGGTGCTGCGCGACGAGCTCGCGCGCCCGGGCCACGTGC
CGCACCTGCTCAACGTGGGTTCGGCGACCGACTGCTACCAGCCCGTGGAGCGGGACCTGGGCCTCACGCGGGCCGTCATC
GAGGTGCTGCGCGACGTGCGCCATCCGTTCTCGCTCATCACCAAGTCGAGCGGTGTGGAGCGCGACATCGACCTGCTCGC
GCCGCTCGCGCGCGACCGCCTGGCCGCCGTGTACGTGACGATCACCACGCTCGACCCCGTGCTGGCGCGCCGGCTGGAGC
CGCGCGCCGCGGCCCCGCACCGCCGGCTGCGCACCCTCCGCACCCTGGTGGAGGCGGGCATTCCCGTCGGCGTGAGCGTG
GCACCGCAAATTCCGTTCATTACCGAGGACATGGAGCAGGTGCTGGAAGCCGCCCGCGATGCCGGCGCCACCTCGGCCTT
CTACACCGCCATCCGCCTGCCCTGGGAGCTGGACGGCCTCATGCGCGAATGGCTGGGCCTGCACTACCCGCAGCGCGCCG
AGCGCGTGATGGCGCGCATCCAGGACCTGCACGGCCTGGACGCCGAAGCGCGCGCCGCAGGCCGCAGCTACGACAGCCGC
TTCGGCTCCCGCATGAAGGGCTCGGGCCTGTGGGCCGACCTGCTGCGCCAGCGGTTCATGGCCGCGTGCCGGCGGCTGGG
GCTGAACCGTGAGCGCATCGAGCTGGACATGGCGCAGTACCGGCCGGGGCTGGCGAGAGGGCAGGGGAGCCTGTTCTGA

Upstream 100 bases:

>100_bases
GGGATATCCGCCACTGTGCCATGGCGGGAAATCTCTTGCTGCGCACAGTGTATCCGACAACTGTATATTCATACAGTTTT
TGGTGCATCCGGAGCTGCCC

Downstream 100 bases:

>100_bases
CATCGTGCTGTCCGGCCCCGCCATGGATCCGGGCCACGGCTGCGGCCGGCCGTCGTCAGGGGCGGCGGCGGGCTTCCGAA
ACGTACGGCGGCGGGGGAAG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTEVHIPLQSIKGRGTAARTPHRFARDARSAFDDGWGGPAAQEGEGGAAAPPSTEVILETARSAICANDSPDIFFDHSVN
PYRGCEHGCVYCYARPTHSYLNLSPGLDFETRIIAKHNIAEVLRDELARPGHVPHLLNVGSATDCYQPVERDLGLTRAVI
EVLRDVRHPFSLITKSSGVERDIDLLAPLARDRLAAVYVTITTLDPVLARRLEPRAAAPHRRLRTLRTLVEAGIPVGVSV
APQIPFITEDMEQVLEAARDAGATSAFYTAIRLPWELDGLMREWLGLHYPQRAERVMARIQDLHGLDAEARAAGRSYDSR
FGSRMKGSGLWADLLRQRFMAACRRLGLNRERIELDMAQYRPGLARGQGSLF

Sequences:

>Translated_372_residues
MTEVHIPLQSIKGRGTAARTPHRFARDARSAFDDGWGGPAAQEGEGGAAAPPSTEVILETARSAICANDSPDIFFDHSVN
PYRGCEHGCVYCYARPTHSYLNLSPGLDFETRIIAKHNIAEVLRDELARPGHVPHLLNVGSATDCYQPVERDLGLTRAVI
EVLRDVRHPFSLITKSSGVERDIDLLAPLARDRLAAVYVTITTLDPVLARRLEPRAAAPHRRLRTLRTLVEAGIPVGVSV
APQIPFITEDMEQVLEAARDAGATSAFYTAIRLPWELDGLMREWLGLHYPQRAERVMARIQDLHGLDAEARAAGRSYDSR
FGSRMKGSGLWADLLRQRFMAACRRLGLNRERIELDMAQYRPGLARGQGSLF
>Mature_371_residues
TEVHIPLQSIKGRGTAARTPHRFARDARSAFDDGWGGPAAQEGEGGAAAPPSTEVILETARSAICANDSPDIFFDHSVNP
YRGCEHGCVYCYARPTHSYLNLSPGLDFETRIIAKHNIAEVLRDELARPGHVPHLLNVGSATDCYQPVERDLGLTRAVIE
VLRDVRHPFSLITKSSGVERDIDLLAPLARDRLAAVYVTITTLDPVLARRLEPRAAAPHRRLRTLRTLVEAGIPVGVSVA
PQIPFITEDMEQVLEAARDAGATSAFYTAIRLPWELDGLMREWLGLHYPQRAERVMARIQDLHGLDAEARAAGRSYDSRF
GSRMKGSGLWADLLRQRFMAACRRLGLNRERIELDMAQYRPGLARGQGSLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41172; Mature: 41041

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVHIPLQSIKGRGTAARTPHRFARDARSAFDDGWGGPAAQEGEGGAAAPPSTEVILET
CCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ARSAICANDSPDIFFDHSVNPYRGCEHGCVYCYARPTHSYLNLSPGLDFETRIIAKHNIA
HHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCEEHHHHHHH
EVLRDELARPGHVPHLLNVGSATDCYQPVERDLGLTRAVIEVLRDVRHPFSLITKSSGVE
HHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
RDIDLLAPLARDRLAAVYVTITTLDPVLARRLEPRAAAPHRRLRTLRTLVEAGIPVGVSV
HHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
APQIPFITEDMEQVLEAARDAGATSAFYTAIRLPWELDGLMREWLGLHYPQRAERVMARI
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
QDLHGLDAEARAAGRSYDSRFGSRMKGSGLWADLLRQRFMAACRRLGLNRERIELDMAQY
HHHHCCCHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
RPGLARGQGSLF
CCCHHCCCCCCC
>Mature Secondary Structure 
TEVHIPLQSIKGRGTAARTPHRFARDARSAFDDGWGGPAAQEGEGGAAAPPSTEVILET
CCEECCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ARSAICANDSPDIFFDHSVNPYRGCEHGCVYCYARPTHSYLNLSPGLDFETRIIAKHNIA
HHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCEEHHHHHHH
EVLRDELARPGHVPHLLNVGSATDCYQPVERDLGLTRAVIEVLRDVRHPFSLITKSSGVE
HHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
RDIDLLAPLARDRLAAVYVTITTLDPVLARRLEPRAAAPHRRLRTLRTLVEAGIPVGVSV
HHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
APQIPFITEDMEQVLEAARDAGATSAFYTAIRLPWELDGLMREWLGLHYPQRAERVMARI
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
QDLHGLDAEARAAGRSYDSRFGSRMKGSGLWADLLRQRFMAACRRLGLNRERIELDMAQY
HHHHCCCHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
RPGLARGQGSLF
CCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]