| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is fabI1 [H]
Identifier: 120610730
GI number: 120610730
Start: 2244087
End: 2244857
Strand: Direct
Name: fabI1 [H]
Synonym: Aave_2051
Alternate gene names: 120610730
Gene position: 2244087-2244857 (Clockwise)
Preceding gene: 120610729
Following gene: 120610738
Centisome position: 41.92
GC content: 69.91
Gene sequence:
>771_bases ATGCCTTTACTGGACCTGCACGGCAAGCGCGGATTGGTCGTCGGCATCGCCAATGACCAGAGCATCGCCTGGGGCTGTGC CCGCGCCTTCCGCGATGCGGGGGCGGAACTGGCGGTCACCTGGCTCAACGACAAGGCCCGGGCGTATGTGGAGCCGCTGG CGCGGCAGGTGGATGCGCCGATCACGCTGCCGCTGGACGTGGAGCAGCCCGGCCAGATGGAGGCGGTATTCGGTGCCGTC GCCCGCGAATGGGGGCGCCTGGATTTCGTGCTGCATTCCATCGCCTTCGCGCCGCGCAGCGATCTTTCCGGGCGCGTGAC CGACAGCTCGCGCGAGGGTTTCGCGCGGGCGATGGATATTTCCTGCCATTCCTTCCTGCGCATGGCCCGGCTGGCCGAGC CGCTGATGCCGCAGGGCGGCAGCCTGATGACGATGAGCTACGTCGGCGCGGCCGAGGTGATTCCCGGCTATGGCGTGATG GGGCCGGTGAAGGCAGCGCTGGAATCCGGCACGCGCTACCTGGCCGCGGAACTGGGGCCGAAGGGGATCCGCGTCAACGC GGTCTCCCCCGGGCCGCTGGCCACGCGGGCGGCCTCCGGCATTCCCGACTTCGACACGCTCATGGCGGATGCCGTGCGGC GGGCACCGCTGCGCCGCCTGGTGGAGCTGGAGGAGATCGGCGCGCTGTGCGCCTTCCTGGCCAGCGACGGTGCGCGGGCC ATCACCGGCAATACGCTGTACGTGGATGCGGGCCACCATATCCTGGGCTGA
Upstream 100 bases:
>100_bases CCGCGAGGCCGGGGAGCATTCCGCAAGCCTTGGTGGCCGCGCTGGCCTTCCTTTTCCTCTCTTTTCTTCCTTTCCTCAAC CTGCCCACCCGGGAGTTCCC
Downstream 100 bases:
>100_bases CAGGGCCGGCGGGCGGCCGGCTGGCGTGGCGTTCCAACGGTGCCGGGGGGGCCGGCGTGCCGGCCGCGGGCGCGCGCCGG GCGCGGATCAGCCCGGCTGC
Product: enoyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPLLDLHGKRGLVVGIANDQSIAWGCARAFRDAGAELAVTWLNDKARAYVEPLARQVDAPITLPLDVEQPGQMEAVFGAV AREWGRLDFVLHSIAFAPRSDLSGRVTDSSREGFARAMDISCHSFLRMARLAEPLMPQGGSLMTMSYVGAAEVIPGYGVM GPVKAALESGTRYLAAELGPKGIRVNAVSPGPLATRAASGIPDFDTLMADAVRRAPLRRLVELEEIGALCAFLASDGARA ITGNTLYVDAGHHILG
Sequences:
>Translated_256_residues MPLLDLHGKRGLVVGIANDQSIAWGCARAFRDAGAELAVTWLNDKARAYVEPLARQVDAPITLPLDVEQPGQMEAVFGAV AREWGRLDFVLHSIAFAPRSDLSGRVTDSSREGFARAMDISCHSFLRMARLAEPLMPQGGSLMTMSYVGAAEVIPGYGVM GPVKAALESGTRYLAAELGPKGIRVNAVSPGPLATRAASGIPDFDTLMADAVRRAPLRRLVELEEIGALCAFLASDGARA ITGNTLYVDAGHHILG >Mature_255_residues PLLDLHGKRGLVVGIANDQSIAWGCARAFRDAGAELAVTWLNDKARAYVEPLARQVDAPITLPLDVEQPGQMEAVFGAVA REWGRLDFVLHSIAFAPRSDLSGRVTDSSREGFARAMDISCHSFLRMARLAEPLMPQGGSLMTMSYVGAAEVIPGYGVMG PVKAALESGTRYLAAELGPKGIRVNAVSPGPLATRAASGIPDFDTLMADAVRRAPLRRLVELEEIGALCAFLASDGARAI TGNTLYVDAGHHILG
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Homo sapiens, GI59889578, Length=236, Percent_Identity=28.8135593220339, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI66933014, Length=232, Percent_Identity=28.0172413793103, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI32483357, Length=172, Percent_Identity=30.2325581395349, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI7705925, Length=251, Percent_Identity=25.8964143426295, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI10190704, Length=201, Percent_Identity=29.3532338308458, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI4503301, Length=222, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1787545, Length=250, Percent_Identity=44, Blast_Score=214, Evalue=5e-57, Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=27.5193798449612, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789378, Length=262, Percent_Identity=24.8091603053435, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788459, Length=240, Percent_Identity=28.75, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1787335, Length=195, Percent_Identity=28.7179487179487, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787905, Length=253, Percent_Identity=25.296442687747, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71994600, Length=244, Percent_Identity=25.8196721311475, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71994604, Length=187, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115534694, Length=115, Percent_Identity=39.1304347826087, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=26.1194029850746, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=26.0377358490566, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=216, Percent_Identity=26.3888888888889, Blast_Score=69, Evalue=6e-13, Organism=Drosophila melanogaster, GI28571526, Length=199, Percent_Identity=30.6532663316583, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI21357041, Length=239, Percent_Identity=28.8702928870293, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24644339, Length=259, Percent_Identity=25.8687258687259, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24644337, Length=202, Percent_Identity=28.7128712871287, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=24.0963855421687, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI23397609, Length=187, Percent_Identity=25.1336898395722, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24643142, Length=145, Percent_Identity=24.1379310344828, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 27179; Mature: 27047
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLDLHGKRGLVVGIANDQSIAWGCARAFRDAGAELAVTWLNDKARAYVEPLARQVDAP CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCC ITLPLDVEQPGQMEAVFGAVAREWGRLDFVLHSIAFAPRSDLSGRVTDSSREGFARAMDI EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH SCHSFLRMARLAEPLMPQGGSLMTMSYVGAAEVIPGYGVMGPVKAALESGTRYLAAELGP HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHCCCEEEEECCCC KGIRVNAVSPGPLATRAASGIPDFDTLMADAVRRAPLRRLVELEEIGALCAFLASDGARA CCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ITGNTLYVDAGHHILG EECCEEEEECCCCCCC >Mature Secondary Structure PLLDLHGKRGLVVGIANDQSIAWGCARAFRDAGAELAVTWLNDKARAYVEPLARQVDAP CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCC ITLPLDVEQPGQMEAVFGAVAREWGRLDFVLHSIAFAPRSDLSGRVTDSSREGFARAMDI EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH SCHSFLRMARLAEPLMPQGGSLMTMSYVGAAEVIPGYGVMGPVKAALESGTRYLAAELGP HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHCCCEEEEECCCC KGIRVNAVSPGPLATRAASGIPDFDTLMADAVRRAPLRRLVELEEIGALCAFLASDGARA CCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ITGNTLYVDAGHHILG EECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]