| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610729
Identifier: 120610729
GI number: 120610729
Start: 2243325
End: 2243819
Strand: Direct
Name: 120610729
Synonym: Aave_2050
Alternate gene names: NA
Gene position: 2243325-2243819 (Clockwise)
Preceding gene: 120610728
Following gene: 120610730
Centisome position: 41.91
GC content: 56.36
Gene sequence:
>495_bases ATGACAGGGACATCCAAAAATGCTGCGCTTTTGGTCCTGATGGACGGATTTTCTGGAAGCCTGCGTCCGCAGGCATTCAA TGATTTCCTGAATGTCGATGAAGAATTCTGCGAGCACAACGCGCTATTGCAGTCCAGGGACCACCAGTCGCTGACCCGGG AGGATCTCGGCAGTGTGGGCTGGAATCCCATCGGTTGCATGAACGTGGCCGGCTGGAGGTACTGGCTTCCGGCACTGGGC AGAATCGCGCTGAGCACGGACACGGCTGGCCGGGGGTACTTCATGTGGGACCTGCTCGTTTACCTGAAAAATCCAGAATC CAATCCGGCGTTTCTTTCGCTAACCCAACAGGAAAGGGAAGCGGTGGCCCGGTTCCTCAAGGAAGCCACGCCCTTTGTCC GTGAAAACCTGGAGCCGGAAGTCGAGGTTGGATACGACCTGAAGCCGGTTCAACTGCAATGGGAAATGTTTTCAAGAGGG GAGGCCGTGCGATGA
Upstream 100 bases:
>100_bases GGTATATTTCATTATTGGCTGCTCACTTTTTTGGGATTGAATTTGAATATGTTCGAGATATGATTTTTGCGAGGTATTTG ATTTTCATGCCGGTTCTGTA
Downstream 100 bases:
>100_bases CGAAATTTCCGAGCATGACGATCGCCGATAACGAGGCACTTCCGCGCCGTTGACCTGGGTCAATGGGCTCGCAGGCCTTT TGCGTACATTGCCCCAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTGTSKNAALLVLMDGFSGSLRPQAFNDFLNVDEEFCEHNALLQSRDHQSLTREDLGSVGWNPIGCMNVAGWRYWLPALG RIALSTDTAGRGYFMWDLLVYLKNPESNPAFLSLTQQEREAVARFLKEATPFVRENLEPEVEVGYDLKPVQLQWEMFSRG EAVR
Sequences:
>Translated_164_residues MTGTSKNAALLVLMDGFSGSLRPQAFNDFLNVDEEFCEHNALLQSRDHQSLTREDLGSVGWNPIGCMNVAGWRYWLPALG RIALSTDTAGRGYFMWDLLVYLKNPESNPAFLSLTQQEREAVARFLKEATPFVRENLEPEVEVGYDLKPVQLQWEMFSRG EAVR >Mature_163_residues TGTSKNAALLVLMDGFSGSLRPQAFNDFLNVDEEFCEHNALLQSRDHQSLTREDLGSVGWNPIGCMNVAGWRYWLPALGR IALSTDTAGRGYFMWDLLVYLKNPESNPAFLSLTQQEREAVARFLKEATPFVRENLEPEVEVGYDLKPVQLQWEMFSRGE AVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18603; Mature: 18472
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTSKNAALLVLMDGFSGSLRPQAFNDFLNVDEEFCEHNALLQSRDHQSLTREDLGSVG CCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC WNPIGCMNVAGWRYWLPALGRIALSTDTAGRGYFMWDLLVYLKNPESNPAFLSLTQQERE CCCCCEECCCCHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHH AVARFLKEATPFVRENLEPEVEVGYDLKPVQLQWEMFSRGEAVR HHHHHHHHCCHHHHHCCCCCEEECCCCCCEEEEEEHHCCCCCCC >Mature Secondary Structure TGTSKNAALLVLMDGFSGSLRPQAFNDFLNVDEEFCEHNALLQSRDHQSLTREDLGSVG CCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC WNPIGCMNVAGWRYWLPALGRIALSTDTAGRGYFMWDLLVYLKNPESNPAFLSLTQQERE CCCCCEECCCCHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHH AVARFLKEATPFVRENLEPEVEVGYDLKPVQLQWEMFSRGEAVR HHHHHHHHCCHHHHHCCCCCEEECCCCCCEEEEEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA