| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610738
Identifier: 120610738
GI number: 120610738
Start: 2255437
End: 2256744
Strand: Direct
Name: 120610738
Synonym: Aave_2060
Alternate gene names: NA
Gene position: 2255437-2256744 (Clockwise)
Preceding gene: 120610730
Following gene: 120610741
Centisome position: 42.14
GC content: 66.51
Gene sequence:
>1308_bases ATGCGCTCGACCATCTGCTCCCCCTTGTTTTCCGTCGCCGCGCTGTGCGCACTGGCGCCCCAGGCGCAGGCATTGGAACT CTACAAGGAGGGTGAAAGCCACCTGAACGCGGAGTTGAAGGCCGGCTATGGGCTCTTCCATTCCGGGCGCAACTACATCG GCCGCCCTGGTGGATTCCAGTGGCAGGAGGGCTTCGCCAAATACGGCGTGAGCGGCGCCACCGGCCGGGTCGGCGGCGGC TCGCTGTACGGGGCCTTCGGCCTTCTCAGCTCCGCCACCTGGGGCGACGGCGATCCGGGGGGATTCACCACGGGGCATGA ACGCCGCACCGCGGTGGAAGAGGCGTATGCCGGCTGGAAATCGGGGGACCTGTTTCCCGCGCTGGGGGCCGACGGCATCG ACGTTTCCGCTGGCCGCCAGGTCGTGAAGGCGGGCTCGGGCTTCCTGATCAACGATGACGGCGTCAACCCCGGCCTGGGC CTGGAAGAAGGCCGCTACGACCGCGGCGGCGCCTACTATTTCGGCCAGCGCCTGTCATTCGCCCGCACGGCCGTGCTGCG ACTGGGAGGAAGCGAGGGCCTGCACGGAAGCGCCATGTGGCTCCGGTCGGACACGCGGCTGCAGGCCAACACCGAACTGG CCGCGGCGACCCTGGACTACACGGGATCGGCGGGGACGACCGGCCTGACCCATGTGCATGTGCTGGATGTCGATGAGCGG TACGCCATCGCTCCCTCGCGGCTGGAGCGCAAGGGCATGAAGGTCTTCAGCCTCCGCGCGGAGGGTGGTGCCGGCATCGA AGGTGCCGACTTCGCTGTCGAGTATGCCTACCAGAAGAAGCGGTCCCGCACGGACAGCGCATGGTATGCCGAGGCCGCGT ACACCTTCTCGCAGATGGCCTGGAAGCCGTCGCTGAGCTTTCGGCATACACGCTATTCCAAGGACTTCGACTCGCTGTTC CAGGGCGGCTTCCGCGGCCGGTACCAGGGCGAGGTCGCGTCGAACTACGCGTTCTCGTACAACTTCAACACCCGGATCAA CGACGTGGCGCTGACGGTGCGGCCCGGCGAAGCGCTGACCGCCACGCTCATGTTCTTCGACTTCCGGACGTTGGCGGACC GGGCTGTCTCGAACCTCGACGCGCAGGAGCTGGCCCTCTACCTGGACTGGGCCATCACGGACCACCTCATGTTCTCCCCG ATCGTCGGGCTCTACAAGCCCCGGAAGTACGAGGCGAACGGCGGCAACCAGAACCGGAGCGCATCGGCGAATCGCTATTT CAAGCTGATGCTCACGGCGACGTTCTGA
Upstream 100 bases:
>100_bases GCTGCCCGCATCGGCGAAGTGCCGTCGCATCGCATCGGTGCCGCATCGCATCGGCATCGCGCGGCAGCACGGGGCGTCCC CATCCCACTCAGGAGACCCC
Downstream 100 bases:
>100_bases CACCCCCGCCCGCCGGCGAGGTTCGCGCTCAGAGCATGCGGCGCAGGACGTCGCTGCGCGGATCGCGGTCGAAGAGCCGG TGCTTGATGGCGCCCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MRSTICSPLFSVAALCALAPQAQALELYKEGESHLNAELKAGYGLFHSGRNYIGRPGGFQWQEGFAKYGVSGATGRVGGG SLYGAFGLLSSATWGDGDPGGFTTGHERRTAVEEAYAGWKSGDLFPALGADGIDVSAGRQVVKAGSGFLINDDGVNPGLG LEEGRYDRGGAYYFGQRLSFARTAVLRLGGSEGLHGSAMWLRSDTRLQANTELAAATLDYTGSAGTTGLTHVHVLDVDER YAIAPSRLERKGMKVFSLRAEGGAGIEGADFAVEYAYQKKRSRTDSAWYAEAAYTFSQMAWKPSLSFRHTRYSKDFDSLF QGGFRGRYQGEVASNYAFSYNFNTRINDVALTVRPGEALTATLMFFDFRTLADRAVSNLDAQELALYLDWAITDHLMFSP IVGLYKPRKYEANGGNQNRSASANRYFKLMLTATF
Sequences:
>Translated_435_residues MRSTICSPLFSVAALCALAPQAQALELYKEGESHLNAELKAGYGLFHSGRNYIGRPGGFQWQEGFAKYGVSGATGRVGGG SLYGAFGLLSSATWGDGDPGGFTTGHERRTAVEEAYAGWKSGDLFPALGADGIDVSAGRQVVKAGSGFLINDDGVNPGLG LEEGRYDRGGAYYFGQRLSFARTAVLRLGGSEGLHGSAMWLRSDTRLQANTELAAATLDYTGSAGTTGLTHVHVLDVDER YAIAPSRLERKGMKVFSLRAEGGAGIEGADFAVEYAYQKKRSRTDSAWYAEAAYTFSQMAWKPSLSFRHTRYSKDFDSLF QGGFRGRYQGEVASNYAFSYNFNTRINDVALTVRPGEALTATLMFFDFRTLADRAVSNLDAQELALYLDWAITDHLMFSP IVGLYKPRKYEANGGNQNRSASANRYFKLMLTATF >Mature_435_residues MRSTICSPLFSVAALCALAPQAQALELYKEGESHLNAELKAGYGLFHSGRNYIGRPGGFQWQEGFAKYGVSGATGRVGGG SLYGAFGLLSSATWGDGDPGGFTTGHERRTAVEEAYAGWKSGDLFPALGADGIDVSAGRQVVKAGSGFLINDDGVNPGLG LEEGRYDRGGAYYFGQRLSFARTAVLRLGGSEGLHGSAMWLRSDTRLQANTELAAATLDYTGSAGTTGLTHVHVLDVDER YAIAPSRLERKGMKVFSLRAEGGAGIEGADFAVEYAYQKKRSRTDSAWYAEAAYTFSQMAWKPSLSFRHTRYSKDFDSLF QGGFRGRYQGEVASNYAFSYNFNTRINDVALTVRPGEALTATLMFFDFRTLADRAVSNLDAQELALYLDWAITDHLMFSP IVGLYKPRKYEANGGNQNRSASANRYFKLMLTATF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47261; Mature: 47261
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTICSPLFSVAALCALAPQAQALELYKEGESHLNAELKAGYGLFHSGRNYIGRPGGFQ CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCHHCCCCEEECCCCCCCCCCCCC WQEGFAKYGVSGATGRVGGGSLYGAFGLLSSATWGDGDPGGFTTGHERRTAVEEAYAGWK HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC SGDLFPALGADGIDVSAGRQVVKAGSGFLINDDGVNPGLGLEEGRYDRGGAYYFGQRLSF CCCCCCCCCCCCCCCHHCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHH ARTAVLRLGGSEGLHGSAMWLRSDTRLQANTELAAATLDYTGSAGTTGLTHVHVLDVDER HHHHHHHCCCCCCCCCCEEEEECCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCC YAIAPSRLERKGMKVFSLRAEGGAGIEGADFAVEYAYQKKRSRTDSAWYAEAAYTFSQMA EECCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH WKPSLSFRHTRYSKDFDSLFQGGFRGRYQGEVASNYAFSYNFNTRINDVALTVRPGEALT CCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCEEEEEECCCEEEEEEEEEECCCHHH ATLMFFDFRTLADRAVSNLDAQELALYLDWAITDHLMFSPIVGLYKPRKYEANGGNQNRS HHHHHHHHHHHHHHHHHCCCHHHEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC ASANRYFKLMLTATF CCCCEEEEEEEEECC >Mature Secondary Structure MRSTICSPLFSVAALCALAPQAQALELYKEGESHLNAELKAGYGLFHSGRNYIGRPGGFQ CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCHHCCCCEEECCCCCCCCCCCCC WQEGFAKYGVSGATGRVGGGSLYGAFGLLSSATWGDGDPGGFTTGHERRTAVEEAYAGWK HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC SGDLFPALGADGIDVSAGRQVVKAGSGFLINDDGVNPGLGLEEGRYDRGGAYYFGQRLSF CCCCCCCCCCCCCCCHHCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHH ARTAVLRLGGSEGLHGSAMWLRSDTRLQANTELAAATLDYTGSAGTTGLTHVHVLDVDER HHHHHHHCCCCCCCCCCEEEEECCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCC YAIAPSRLERKGMKVFSLRAEGGAGIEGADFAVEYAYQKKRSRTDSAWYAEAAYTFSQMA EECCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH WKPSLSFRHTRYSKDFDSLFQGGFRGRYQGEVASNYAFSYNFNTRINDVALTVRPGEALT CCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCEEEEEECCCEEEEEEEEEECCCHHH ATLMFFDFRTLADRAVSNLDAQELALYLDWAITDHLMFSPIVGLYKPRKYEANGGNQNRS HHHHHHHHHHHHHHHHHCCCHHHEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC ASANRYFKLMLTATF CCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA