| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is rhsD [H]
Identifier: 120610728
GI number: 120610728
Start: 2237201
End: 2242513
Strand: Direct
Name: rhsD [H]
Synonym: Aave_2049
Alternate gene names: 120610728
Gene position: 2237201-2242513 (Clockwise)
Preceding gene: 120610727
Following gene: 120610729
Centisome position: 41.8
GC content: 69.21
Gene sequence:
>5313_bases ATGAGCGGCAAACCCGCAGCCCGGCAGGGCGACTTGACAAAAAAAGGCGGCCCGATCGTCCAGGGCTCGGCGACGGTGCT GATCGGCTCGGCGGGAGGCGTGGCGTGCTCGGTGTGCCCCGGGGGCATGGCGGTGGGCAACCCGGTGAACCCGGCGCTGG GCGCGAAGGTGCTCACGGGGGGCGATGAACTGGACTTCGCGCTGCCCGGGCCATTGCCGCTGGCGTGGCAGCGGGTGTAC AGCAGCTATGTGAACGCGGAGCATGGCGCGGCGTGCGGGCTGCTGGGGTATGGGTGGAAGCTGCCGCTGGAACTGCGGTT GGTACTGCAGGATGAGCGCGCGGTGCTCTTCGATGCATCCGGACGGGCGATCACGTTCGAGGAGCCCTTGCAGCCGGGGC AGGCGCTGCACAGCAGCAGCGAGGACCTGTGGCTGTTGCGGGGTGGGGGCATGGCTGGCTCCACGGCCCCATCCTCCACG CCTGCCGAACTGCTGCCCTGGGCGCAGCAACCGCGCTGGTCGCACGTGCCGGCGGTGCTGCGTGCGGACCCGGGCTGCGT GATCGCCGTGCCGGGCGCGGGCGGTGCTGGTGCGCCGGTCTGGGTGTTCCTGACGGCGGGCGTATCGGGCGACGGAACAG CTTCGGGCCATGTCCTGCATGCCGTGATCGACCGCTTCGGCCGCAGCCAGCGCTACCAGTGGGGCACGGAAGGCGAACAG CAGGGCCGCGTCGTAGGCATCACCGATGGCAGCGGGCGACGCTATGCGCTGCGCTACGAGCGCATCGCGCAGGATGCCGG GACAGCACAGACAAGTGCCCATCCCCTGCTGCAACCCGACGACGGTGTAAGGCTGGTGGGCGTGGACTGCACCTTCAGCC CGCTCGACCCTGCAGTGATACCCGGCGCGGCCCCGCGCCCGCAACCCCTGGTGGGCTACCGCTACGACAGCGCAGGCAAC CTGGCCGAGGTGCTGGGCGCGGACGGCACCGTGCTGCGCCGCTTCGGCTACGACGCATTGCACCGGATGACGGAGCACCA GGTGCGCCAGGGCCCCAGGCACCGCTACGTCTATGAGGACCAGACCGCGCAGGGCCGTCGCCAGGGGCTGGCGGCCCGCC CGGGTGCACGCGTGGCCGAGCAGCACAACGAAGAGGGGCTGTCATACTTCTTCGAGTACAGCCAGGCATCCGCGCAACCT GCGCCATCCACGCACACCACGCAGGCGACCCAGGGCCCGGAGGATGACCAGGATGGCCCGACTCCGGCCACCGCGTCTTT GCCCAGCAATCGCCAAAGCAGCACGTTGGTGCACGACAGCCTGGGCCGTACCACGGCCTACCACTTCGAAGGCGAAGGCG GCCTCAAGCGCCTGGTGCGTCTCGTGGCCCCGGATGGGACCGAACAGAGCTACCGCCACGACAGCGCCGGCCGTCGCCTC TCGGCCACCGATGCGCTGGGCCGCACGACGTGGTGGCGCTACGACGGCGCGGGCCGGCTGCTGGGTGTGCAGGGCCCGGA CGGGCGCAGCACGCAACAGCACTGGGGCGCGGCGGGCAGCGCGCAGGACGGCTTGCTGTTGGCCAGCCAGGACGCGGCGG GGCTGCGCACGCACTTCCGCTACGACGACTGGGGCCGGCTGGTGGAGGTGGCGATGGCACCAGCCGGGAGCGGGGACGGA GCCACGAACACCCAGGTCCTCACCACCCGCTTCGAATACGAACAACCCCGGCAGGATGCCGCCACCAGCACAACTGCCGG CAACATCGCCTTCCCACCGCACACGCTCGCCTGGTGGGACCAGCCCGTGGCGATGATCGACGCGCAGGGCGGGCGTAGCC TCTACGCCTACAACGCCTGCGGCCAGCTCGCGCGGCACATCGACTGCTCCGGCCGCAGCCAGTCCTGGCGCCACGGCGCC TGGGGCGAGGTGCTGGAGGCGACGGACGCGCTGGGCCAGCGCACCCAGCTGCACCACGTGCTGGAGCATGGCGCGCTGCG GCTGGTGGGCGTGCAGCAGCCGGGCAACACGGCGGTGCGCCACCGCTGGTCGGCCGCCGGCACGCTGGAGGCGACCACCT ACGGCGCGCACGACGTGCTGGAAGGCACGGGCGAGCCCGCGGGCACCAGCACGACAGTCACCTACCGCCACGACCTCTGG GGCCGGGTGGTGGAGCAGGTGCAGGCGGGCCGGGGCGTGCAGCTGCGCTACGACGTGGCCGGGCGGCTGCAGGAACTCGT CAACGAGAACGGCGATGTCACACGCTTCGTGCACGACGCGGCCGACCGGCTGGTGCAGGAAGTGGGCTTCGATGGGCGCA GCCAGGTGTATGGCTACGACGCGGCCGGCCAGCTCACGCACACGGGCGACGGGCATGGCGAAGGCCACCACCCGGGAGCG GCGGCGCGGCCGGAACTCGGGGCGGTGGTGCGCACGCGGCTGCACTACGACCTGGGCGGCCGGCTGGTGGCGCGTGTGGC CGTACGGCTGCCGGCAGCGGCATTGGCCGGTGTTGGCGTCAGCGTCGCAGGTGATGCGCCCGACAACCCCACGGCTGAAC CGCATGCCGTGCTGCAGATCCAGCGCTTCGGGCACACCGCGGCCGGAGCCCTGCTGCAGGCGCGGACCTGGGAGACAGAA CTGCCCCACGGGATCGAGCCCATGGCCCTGCCAACGGCCCTGTCTCCCGACTCCTCGCGCCCAGGCGCTGCCACGGACCG ACCCATCCCCCTCGCCGAGCGCTGGCTGGCACTGGACACGCAGGCACTGTTGTCCCTGCTGGACCGCCCCAGCGATCCGA CCCAGGCCCCGCTGGCAGCCGCGCTGCAGGCGCAGCGGCTGCAGCCCGAGGCCCGCGTGGCCCTGGCGCGCGATGCCTTC GGGCGTGTCTGTGGAGAGACCCAGACGCTGTACCGGCAGGCCACCCAGCCGCAAGCGCCCCATGCCGGCGGCGAGCCGCC CGTGGAGTTCGAGCACGCGATCACCCACACGCTGGGCCCGCTGGGCCAGCGCACGGCCACTCAGGCGCAGGGCCTGGGCA CGCTGCAGTGGCTGGCCTACGGCTCGGGCCATGTGCACGGGCTGCTGCTGGACGGCCAGCCGCTGGTGGACTGGGAGCGC GATGCGCTGCACCGCGAGGTGGGGCGTACGCTGCACGTGCTCGAAGGCAAAGACAACGAAGACCTGCACGCCATCGTGCA TGCGCGGCAGCTCGACCCGATGGGCCGCATGCTGCACCAGGACTGGCGCGGCCTGCGCCATGCGACGCCGGTGGTTCCTG CCGACCCGGCCAACGCCTTCGGAACGGGTCCTTCGTCCGCCGCGGGCCGCATCGCCCCGGCCCTGGGCCCGCTGTCCACG CTCGCGCAGCGCCGCTACTGGTACGACCCGCTGGGCCAACTGGTCGGCGTGCAGACCCCGGGCGAAGCCACGCGCTACGG CTACGACGCCTGGCAGCGCCTGAGCGGGCTGCACCGCGCGGGCCAGGGTACGCCGGAAGTGCAAGCGCACTGGGCGCTGG ACGCGGCGGGCAACCGCCTGCCCGCGTCCCTGGATGCGCGCGCGGCCGGGTCTTCTGCGAGCGAGCGCCAGGGCTGGGCA CGGCAGGTGCGCGAGAACCTGCACGATGCGGACTTCGACCTGCTGCGCGCGGGCGACGGGCCCGGCGAAGGTGCAGGCCC GGTCACGCGCTGGCCGGGCAACCGCATCGGGTGGAGCACCCCCGAACCGGATGCCGATGGCACCAGCATCGCTGGCAGCG ACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCAACGGCATCCTGATCCGCTACCGCTACGACGCCTTCGGC AACCGGGTGCAGGCGCTGCACGCCGACGGCCGGGCGCAGCGGCTGCGCTACGACGCGCTGCACCAATTGCGCGAGGTCTG GCAGCGCGAGGCAGCGGGTGGCGCCTGGCAGCGGGTGGCCTGCTACCGCTACGACCCCTTCGGGCGGCGGCTGGCCAAGA CCGTCTTCGGGCACGGCAACAGAAGCCGAAACGGCAACGCACCTGCATCGGGACCGGCGACCACCACCTATGCCGGCTGG GACGGCGACCGCCTCGTGCACAACGAAGGCCCGCAGGGGCTGCAGCACGTGCTCTACGAGCCCGGCTCCTTCGCGCCGCT GCTGCGCCTGGAGCGCGAGCAGGCCATTCCCACGGCCATGCAGGCCATGCTGGTGATGGAAGAAAACCGTGGAAGCATCG CCAATGATGGTCCGGATGGCGGTGAATTCCCCGCCGCAGCCCTGTTCGCGGGCCTGCCGCGAGCCCAGCGCGAACTGCTT GAGCGTGCCCTGCACGACGCCACGGGCCCCCAGGGGGATGCACTACTGGCGCGCCTGCGGGCAGGCCTACCCGATGAGGC CGGCGCATTGCTGGCTGCGGGGGTGCAGTCCGTGCGCCGGCAACAGCAGGTCGCCACGCAAGCCCACTCGACGCGTATCC GCCATTTCCTGTGCGATCACCTGGGCACGCCTATTGCCTTGGTGGACGCCAACGGCCCGCAGGCGGGCCTGGTCACCTGG GCCGCGACCTACCACGCCTGGGGTGCCGTGCGCGAGGAATACGACCCGCACGGCATCGGCCAGGACATCCGTTTCCAGGG CCAGCAGCTCGATGTGGAGACAGGGTTGCACTACAACCGGTTCCGGTACTACGACCCCCTGCTGGGGCAGTATGTGACGC AGGATCCGATTGGGCTGCTTGGCGGCTTGAATAAGTTCACCTATCCGGGAAACCCGATAAGCTGGATAGACCCCCTGGGA TTGTCTGGAATATTGACCATCCAATCTTCAGGCAATGGAAATCCGTTGTCTGGCCATTCATGGATAACGTACGCTCCAGA TGGCGGTTATCCGACTACCTATGGTACTTGGGGGAATAATCCCACGGGCCAAGGAAATGGGCTCTTCGAGAATTTAGAGA TTGGCCGTAATGCAGATGCCACGCGATCTATGCGAATCAACGATGAACAAGAGAAGGAGTTGATGGCGAAAATTGAAGAC TACAAGAATAGGAAAGAAAACGCCTGGAAGCTTGGTGCTCCATGCTCGAGCTTTGCAAGAGATGCTTGGCAGACTGCAAC GGGTGAAAATTTGAACTCGAACCTTGGCCCCATCAGTAACCCGAGTACTCTAAAGAATTCGATTATTAATGCGAATGGAG GGAAGGTAAGTGAATTCGCAACCAAGCCCAACGGGACTTCAAGTGCGTCCTTCGGTTCTTTTGGTCGCTCTTCAGGTAGT GTTTCACTAAACTCACTTGGCAGTTCTTTATGA
Upstream 100 bases:
>100_bases GAGAGCCACAGGTACTGCTTGCTTGAAGGAGCGCAGTGCCTTGGCCCCGTGGGCGCCACGACGAAGAACAAATAAATAAG CAAGCAAGGGGAACCAGAAA
Downstream 100 bases:
>100_bases GATTTATACGCTTATTTTTTATGGGACTGATCTCTTTTATTTTATCGGCTTGCTCTGCGACTGTGCTTGAGTACAAGGAC GTCGGAGATTTTGAGGTTCG
Product: YD repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1770; Mature: 1769
Protein sequence:
>1770_residues MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVY SSYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDASGRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSST PAELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQ QGRVVGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLVGVDCTFSPLDPAVIPGAAPRPQPLVGYRYDSAGN LAEVLGADGTVLRRFGYDALHRMTEHQVRQGPRHRYVYEDQTAQGRRQGLAARPGARVAEQHNEEGLSYFFEYSQASAQP APSTHTTQATQGPEDDQDGPTPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDGTEQSYRHDSAGRRL SATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLLLASQDAAGLRTHFRYDDWGRLVEVAMAPAGSGDG ATNTQVLTTRFEYEQPRQDAATSTTAGNIAFPPHTLAWWDQPVAMIDAQGGRSLYAYNACGQLARHIDCSGRSQSWRHGA WGEVLEATDALGQRTQLHHVLEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEPAGTSTTVTYRHDLW GRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQEVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHPGA AARPELGAVVRTRLHYDLGGRLVARVAVRLPAAALAGVGVSVAGDAPDNPTAEPHAVLQIQRFGHTAAGALLQARTWETE LPHGIEPMALPTALSPDSSRPGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQRLQPEARVALARDAF GRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTATQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWER DALHREVGRTLHVLEGKDNEDLHAIVHARQLDPMGRMLHQDWRGLRHATPVVPADPANAFGTGPSSAAGRIAPALGPLST LAQRRYWYDPLGQLVGVQTPGEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDARAAGSSASERQGWA RQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDADGTSIAGSDGNGNGNGNGNGNGNGILIRYRYDAFG NRVQALHADGRAQRLRYDALHQLREVWQREAAGGAWQRVACYRYDPFGRRLAKTVFGHGNRSRNGNAPASGPATTTYAGW DGDRLVHNEGPQGLQHVLYEPGSFAPLLRLEREQAIPTAMQAMLVMEENRGSIANDGPDGGEFPAAALFAGLPRAQRELL ERALHDATGPQGDALLARLRAGLPDEAGALLAAGVQSVRRQQQVATQAHSTRIRHFLCDHLGTPIALVDANGPQAGLVTW AATYHAWGAVREEYDPHGIGQDIRFQGQQLDVETGLHYNRFRYYDPLLGQYVTQDPIGLLGGLNKFTYPGNPISWIDPLG LSGILTIQSSGNGNPLSGHSWITYAPDGGYPTTYGTWGNNPTGQGNGLFENLEIGRNADATRSMRINDEQEKELMAKIED YKNRKENAWKLGAPCSSFARDAWQTATGENLNSNLGPISNPSTLKNSIINANGGKVSEFATKPNGTSSASFGSFGRSSGS VSLNSLGSSL
Sequences:
>Translated_1770_residues MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVY SSYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDASGRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSST PAELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQ QGRVVGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLVGVDCTFSPLDPAVIPGAAPRPQPLVGYRYDSAGN LAEVLGADGTVLRRFGYDALHRMTEHQVRQGPRHRYVYEDQTAQGRRQGLAARPGARVAEQHNEEGLSYFFEYSQASAQP APSTHTTQATQGPEDDQDGPTPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDGTEQSYRHDSAGRRL SATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLLLASQDAAGLRTHFRYDDWGRLVEVAMAPAGSGDG ATNTQVLTTRFEYEQPRQDAATSTTAGNIAFPPHTLAWWDQPVAMIDAQGGRSLYAYNACGQLARHIDCSGRSQSWRHGA WGEVLEATDALGQRTQLHHVLEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEPAGTSTTVTYRHDLW GRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQEVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHPGA AARPELGAVVRTRLHYDLGGRLVARVAVRLPAAALAGVGVSVAGDAPDNPTAEPHAVLQIQRFGHTAAGALLQARTWETE LPHGIEPMALPTALSPDSSRPGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQRLQPEARVALARDAF GRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTATQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWER DALHREVGRTLHVLEGKDNEDLHAIVHARQLDPMGRMLHQDWRGLRHATPVVPADPANAFGTGPSSAAGRIAPALGPLST LAQRRYWYDPLGQLVGVQTPGEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDARAAGSSASERQGWA RQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDADGTSIAGSDGNGNGNGNGNGNGNGILIRYRYDAFG NRVQALHADGRAQRLRYDALHQLREVWQREAAGGAWQRVACYRYDPFGRRLAKTVFGHGNRSRNGNAPASGPATTTYAGW DGDRLVHNEGPQGLQHVLYEPGSFAPLLRLEREQAIPTAMQAMLVMEENRGSIANDGPDGGEFPAAALFAGLPRAQRELL ERALHDATGPQGDALLARLRAGLPDEAGALLAAGVQSVRRQQQVATQAHSTRIRHFLCDHLGTPIALVDANGPQAGLVTW AATYHAWGAVREEYDPHGIGQDIRFQGQQLDVETGLHYNRFRYYDPLLGQYVTQDPIGLLGGLNKFTYPGNPISWIDPLG LSGILTIQSSGNGNPLSGHSWITYAPDGGYPTTYGTWGNNPTGQGNGLFENLEIGRNADATRSMRINDEQEKELMAKIED YKNRKENAWKLGAPCSSFARDAWQTATGENLNSNLGPISNPSTLKNSIINANGGKVSEFATKPNGTSSASFGSFGRSSGS VSLNSLGSSL >Mature_1769_residues SGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVYS SYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDASGRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSSTP AELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQQ GRVVGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLVGVDCTFSPLDPAVIPGAAPRPQPLVGYRYDSAGNL AEVLGADGTVLRRFGYDALHRMTEHQVRQGPRHRYVYEDQTAQGRRQGLAARPGARVAEQHNEEGLSYFFEYSQASAQPA PSTHTTQATQGPEDDQDGPTPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDGTEQSYRHDSAGRRLS ATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLLLASQDAAGLRTHFRYDDWGRLVEVAMAPAGSGDGA TNTQVLTTRFEYEQPRQDAATSTTAGNIAFPPHTLAWWDQPVAMIDAQGGRSLYAYNACGQLARHIDCSGRSQSWRHGAW GEVLEATDALGQRTQLHHVLEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEPAGTSTTVTYRHDLWG RVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQEVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHPGAA ARPELGAVVRTRLHYDLGGRLVARVAVRLPAAALAGVGVSVAGDAPDNPTAEPHAVLQIQRFGHTAAGALLQARTWETEL PHGIEPMALPTALSPDSSRPGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQRLQPEARVALARDAFG RVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTATQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWERD ALHREVGRTLHVLEGKDNEDLHAIVHARQLDPMGRMLHQDWRGLRHATPVVPADPANAFGTGPSSAAGRIAPALGPLSTL AQRRYWYDPLGQLVGVQTPGEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDARAAGSSASERQGWAR QVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDADGTSIAGSDGNGNGNGNGNGNGNGILIRYRYDAFGN RVQALHADGRAQRLRYDALHQLREVWQREAAGGAWQRVACYRYDPFGRRLAKTVFGHGNRSRNGNAPASGPATTTYAGWD GDRLVHNEGPQGLQHVLYEPGSFAPLLRLEREQAIPTAMQAMLVMEENRGSIANDGPDGGEFPAAALFAGLPRAQRELLE RALHDATGPQGDALLARLRAGLPDEAGALLAAGVQSVRRQQQVATQAHSTRIRHFLCDHLGTPIALVDANGPQAGLVTWA ATYHAWGAVREEYDPHGIGQDIRFQGQQLDVETGLHYNRFRYYDPLLGQYVTQDPIGLLGGLNKFTYPGNPISWIDPLGL SGILTIQSSGNGNPLSGHSWITYAPDGGYPTTYGTWGNNPTGQGNGLFENLEIGRNADATRSMRINDEQEKELMAKIEDY KNRKENAWKLGAPCSSFARDAWQTATGENLNSNLGPISNPSTLKNSIINANGGKVSEFATKPNGTSSASFGSFGRSSGSV SLNSLGSSL
Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]
COG id: COG3209
COG function: function code M; Rhs family protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RHS family [H]
Homologues:
Organism=Escherichia coli, GI1786706, Length=820, Percent_Identity=35.1219512195122, Blast_Score=359, Evalue=1e-100, Organism=Escherichia coli, GI1786917, Length=853, Percent_Identity=33.5287221570926, Blast_Score=345, Evalue=1e-95, Organism=Escherichia coli, GI1790020, Length=860, Percent_Identity=33.2558139534884, Blast_Score=339, Evalue=1e-93, Organism=Escherichia coli, GI48994942, Length=860, Percent_Identity=33.2558139534884, Blast_Score=338, Evalue=1e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001826 - InterPro: IPR022385 - InterPro: IPR006530 [H]
Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]
EC number: NA
Molecular weight: Translated: 188932; Mature: 188801
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTG CCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCEEEEC GDELDFALPGPLPLAWQRVYSSYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDAS CCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEECC GRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSSTPAELLPWAQQPRWSHVPAVL CCEEEECCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCE RADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQ ECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC QGRVVGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLVGVDCTFSPLDPAVI CCCEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC PGAAPRPQPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQGPRHRYVYED CCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEECC QTAQGRRQGLAARPGARVAEQHNEEGLSYFFEYSQASAQPAPSTHTTQATQGPEDDQDGP CHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDGTEQSYRHDSAGRRL CCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCEE SATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLLLASQDAAGLRTHFR EHHHHHCCCEEEEECCCCCEEEECCCCCCCHHHHCCCCCCCCCCEEEECCCCCCHHHHCC YDDWGRLVEVAMAPAGSGDGATNTQVLTTRFEYEQPRQDAATSTTAGNIAFPPHTLAWWD CCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHCC QPVAMIDAQGGRSLYAYNACGQLARHIDCSGRSQSWRHGAWGEVLEATDALGQRTQLHHV CCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEPAGTSTTVTYRHDLW HHCCCEEEEEECCCCCHHHHEECCCCCCEEEECCCCHHHHCCCCCCCCCCEEEEEHHHHH GRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQEVGFDGRSQVYGYD HHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC AAGQLTHTGDGHGEGHHPGAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAAALAGVGV CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCE SVAGDAPDNPTAEPHAVLQIQRFGHTAAGALLQARTWETELPHGIEPMALPTALSPDSSR EEECCCCCCCCCCCHHEEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQRLQPEARVALARDAF CCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH GRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTATQAQGLGTLQWLAY HHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEE GSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLEGKDNEDLHAIVHARQLDPMGRMLHQ CCCCEEEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHH DWRGLRHATPVVPADPANAFGTGPSSAAGRIAPALGPLSTLAQRRYWYDPLGQLVGVQTP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC GEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDARAAGSSASERQGWA CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH RQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDADGTSIAGSDGNGNGN HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC GNGNGNGNGILIRYRYDAFGNRVQALHADGRAQRLRYDALHQLREVWQREAAGGAWQRVA CCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEE CYRYDPFGRRLAKTVFGHGNRSRNGNAPASGPATTTYAGWDGDRLVHNEGPQGLQHVLYE EEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCHHHHHHHHCC PGSFAPLLRLEREQAIPTAMQAMLVMEENRGSIANDGPDGGEFPAAALFAGLPRAQRELL CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH ERALHDATGPQGDALLARLRAGLPDEAGALLAAGVQSVRRQQQVATQAHSTRIRHFLCDH HHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHGIGQDIRFQGQQLDVETGLHYNR CCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEHHCCCCCCH FRYYDPLLGQYVTQDPIGLLGGLNKFTYPGNPISWIDPLGLSGILTIQSSGNGNPLSGHS HHHHCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC WITYAPDGGYPTTYGTWGNNPTGQGNGLFENLEIGRNADATRSMRINDEQEKELMAKIED EEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHH YKNRKENAWKLGAPCSSFARDAWQTATGENLNSNLGPISNPSTLKNSIINANGGKVSEFA HHCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEHHHC TKPNGTSSASFGSFGRSSGSVSLNSLGSSL CCCCCCCCCCCCCCCCCCCCEEHHHCCCCC >Mature Secondary Structure SGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTG CCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCEEEEC GDELDFALPGPLPLAWQRVYSSYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDAS CCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEECC GRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSSTPAELLPWAQQPRWSHVPAVL CCEEEECCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCE RADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQ ECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC QGRVVGITDGSGRRYALRYERIAQDAGTAQTSAHPLLQPDDGVRLVGVDCTFSPLDPAVI CCCEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC PGAAPRPQPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQGPRHRYVYED CCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEECC QTAQGRRQGLAARPGARVAEQHNEEGLSYFFEYSQASAQPAPSTHTTQATQGPEDDQDGP CHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TPATASLPSNRQSSTLVHDSLGRTTAYHFEGEGGLKRLVRLVAPDGTEQSYRHDSAGRRL CCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCEE SATDALGRTTWWRYDGAGRLLGVQGPDGRSTQQHWGAAGSAQDGLLLASQDAAGLRTHFR EHHHHHCCCEEEEECCCCCEEEECCCCCCCHHHHCCCCCCCCCCEEEECCCCCCHHHHCC YDDWGRLVEVAMAPAGSGDGATNTQVLTTRFEYEQPRQDAATSTTAGNIAFPPHTLAWWD CCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHCC QPVAMIDAQGGRSLYAYNACGQLARHIDCSGRSQSWRHGAWGEVLEATDALGQRTQLHHV CCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LEHGALRLVGVQQPGNTAVRHRWSAAGTLEATTYGAHDVLEGTGEPAGTSTTVTYRHDLW HHCCCEEEEEECCCCCHHHHEECCCCCCEEEECCCCHHHHCCCCCCCCCCEEEEEHHHHH GRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDAADRLVQEVGFDGRSQVYGYD HHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC AAGQLTHTGDGHGEGHHPGAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAAALAGVGV CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCE SVAGDAPDNPTAEPHAVLQIQRFGHTAAGALLQARTWETELPHGIEPMALPTALSPDSSR EEECCCCCCCCCCCHHEEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PGAATDRPIPLAERWLALDTQALLSLLDRPSDPTQAPLAAALQAQRLQPEARVALARDAF CCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH GRVCGETQTLYRQATQPQAPHAGGEPPVEFEHAITHTLGPLGQRTATQAQGLGTLQWLAY HHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEE GSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLEGKDNEDLHAIVHARQLDPMGRMLHQ CCCCEEEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHH DWRGLRHATPVVPADPANAFGTGPSSAAGRIAPALGPLSTLAQRRYWYDPLGQLVGVQTP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC GEATRYGYDAWQRLSGLHRAGQGTPEVQAHWALDAAGNRLPASLDARAAGSSASERQGWA CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH RQVRENLHDADFDLLRAGDGPGEGAGPVTRWPGNRIGWSTPEPDADGTSIAGSDGNGNGN HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC GNGNGNGNGILIRYRYDAFGNRVQALHADGRAQRLRYDALHQLREVWQREAAGGAWQRVA CCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEE CYRYDPFGRRLAKTVFGHGNRSRNGNAPASGPATTTYAGWDGDRLVHNEGPQGLQHVLYE EEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCHHHHHHHHCC PGSFAPLLRLEREQAIPTAMQAMLVMEENRGSIANDGPDGGEFPAAALFAGLPRAQRELL CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH ERALHDATGPQGDALLARLRAGLPDEAGALLAAGVQSVRRQQQVATQAHSTRIRHFLCDH HHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHGIGQDIRFQGQQLDVETGLHYNR CCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEHHCCCCCCH FRYYDPLLGQYVTQDPIGLLGGLNKFTYPGNPISWIDPLGLSGILTIQSSGNGNPLSGHS HHHHCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC WITYAPDGGYPTTYGTWGNNPTGQGNGLFENLEIGRNADATRSMRINDEQEKELMAKIED EEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHH YKNRKENAWKLGAPCSSFARDAWQTATGENLNSNLGPISNPSTLKNSIINANGGKVSEFA HHCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEHHHC TKPNGTSSASFGSFGRSSGSVSLNSLGSSL CCCCCCCCCCCCCCCCCCCCEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1766878; 9278503; 2644231; 2403547; 7934896 [H]