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The map label for this gene is 120610727

Identifier: 120610727

GI number: 120610727

Start: 2236487

End: 2237038

Strand: Direct

Name: 120610727

Synonym: Aave_2048

Alternate gene names: NA

Gene position: 2236487-2237038 (Clockwise)

Preceding gene: 120610726

Following gene: 120610728

Centisome position: 41.78

GC content: 65.94

Gene sequence:

>552_bases
GTGGATGGCGACGAGACCATCACCATCCACTCCAACCGCAAGGAGCGGGTGGACCACAACGAGACGATCTCGATCGGCGA
CAACCGCGACGAGACCGTGGGCGCCAACGAAGACATCCGCATCGGCAGCAATCGCAGCAAGACCGTCGGGCAGAGCGAGA
AGGACCGCATCGGCACCAGCTGGAACATCCGGGTGGGCACGATGAAGACCGAGACCATCGGGATGACGGCCATGCAGAAC
GTGGGCCTGGCCAAGATGGTGAACGTGGGGCTGGCCTACAGCGTCAACATCGGCGGCGTGCGCAACGACATCGTGGGCGC
GAACTGGACCCGCACGGTCATCGGCAGCGACTCGGTGAGCGTGGGCTCGGACCGCAAGGCGAGCGTGAGCGGCACGGACA
GCCTGGAGGTGTCGGGCGCGCTCACGGTGAAGGCCAGGACCATCACGCTGGAGGCGGGCGACGAGATCACGCTGCGCTGC
GGATCGAGCACGGTGCGGCTCACGCCCGCGCTCATCGAAGTGCTGTCCTCGCTGGACAAGCTCAACTGCTAG

Upstream 100 bases:

>100_bases
GACCATCGACCGGGACGAGACGAACACCATCCACCGGGACCGGACCGAGACGGTCGATCGCAACGAGAAGATCACGGTGC
ATGGCTGGCGCACCGAGTAA

Downstream 100 bases:

>100_bases
ACATCCGTGAAACGTGCTCCGCGCGCACGCGCGCAGGAGCGGGGCATCGCAACCACCATCCAGAGAGCCACAGGTACTGC
TTGCTTGAAGGAGCGCAGTG

Product: Gp5 domain-containing protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Family Protein; Rhs-Family Protein; Conserved Hypothethical Protein; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Rhs Element Vgr Protein Subfamily; Rhs Element Vgr Family Protein

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDGDETITIHSNRKERVDHNETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQN
VGLAKMVNVGLAYSVNIGGVRNDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTITLEAGDEITLRC
GSSTVRLTPALIEVLSSLDKLNC

Sequences:

>Translated_183_residues
MDGDETITIHSNRKERVDHNETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQN
VGLAKMVNVGLAYSVNIGGVRNDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTITLEAGDEITLRC
GSSTVRLTPALIEVLSSLDKLNC
>Mature_183_residues
MDGDETITIHSNRKERVDHNETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQN
VGLAKMVNVGLAYSVNIGGVRNDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTITLEAGDEITLRC
GSSTVRLTPALIEVLSSLDKLNC

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19482; Mature: 19482

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGDETITIHSNRKERVDHNETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTS
CCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHCCCCE
WNIRVGTMKTETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRNDIVGANWTRTVIGSDSVS
EEEEEECEEECCCCHHHHHCCCHHHEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCEE
VGSDRKASVSGTDSLEVSGALTVKARTITLEAGDEITLRCGSSTVRLTPALIEVLSSLDK
CCCCCCCCCCCCCCEEECEEEEEEEEEEEEECCCEEEEEECCCEEEECHHHHHHHHHHHH
LNC
CCC
>Mature Secondary Structure
MDGDETITIHSNRKERVDHNETISIGDNRDETVGANEDIRIGSNRSKTVGQSEKDRIGTS
CCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHCCCCE
WNIRVGTMKTETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRNDIVGANWTRTVIGSDSVS
EEEEEECEEECCCCHHHHHCCCHHHEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCEE
VGSDRKASVSGTDSLEVSGALTVKARTITLEAGDEITLRCGSSTVRLTPALIEVLSSLDK
CCCCCCCCCCCCCCEEECEEEEEEEEEEEEECCCEEEEEECCCEEEECHHHHHHHHHHHH
LNC
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA