Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is nanA2 [H]
Identifier: 120610080
GI number: 120610080
Start: 1526560
End: 1527498
Strand: Direct
Name: nanA2 [H]
Synonym: Aave_1393
Alternate gene names: 120610080
Gene position: 1526560-1527498 (Clockwise)
Preceding gene: 120610078
Following gene: 120610082
Centisome position: 28.52
GC content: 69.12
Gene sequence:
>939_bases ATGCCTTCCATCGCGAATTATCGCGGCATCATCCCCGCCATTTCGTGCCCCTTCACGCCGGACCACCGCATCGACGAGCC CGCCCTGCGCAAGCTCGCCTCCTGGCTCGCCGGCCACGACGGCGTGGTCGCCATCATGACCAACGGCCACACGGGCGAGG TGTTCTCGCTCACGCCCGCCGAGCGCGCCGAGGTCACCCGCATCGTGGCGGACGAACTCAAGGGCCGCTGCCCCGTCATC TCGTCCATCGTCTGCGAGGGCCTGAAGGACGCCGCCGACCATGCCCGCGCCGCCGTCGCGGCCGGCGCCGTCGCGCTCGA CGTGATGCCCCCGCACCACTGGCTGCGCTTCGGCTTCACCTCCGGCCATGCCCTGCAGTACTTCGAGGCCATCCACCAGG CCGCCCCGGAAGCCGACCTCGTCTGCCACGTCTATCCCGCCTGGACGCGCGCCTCCTACTCGTCGCAACTGCTCGCCGAC CTCGCGAAGCTGCCCTACCTGCAGGCCTTCAAGGTGGGCCAGCGCGACATGAACAAATACGCCCGTGACATCCAGGCGAT CCGCGAGGCCGATGCCTCCAAGGCCATCCTCACCTGCCACGACGAATACCTGCTCGCCTCCATGGTGCAGGGCGTCGATG GCGCGCTGGTCGGCTTCGCCACCTTCATTCCCCAGCTCATCATCGACCTGTGGAACGCCGTCAAGGCGGGCGACCTCAAG AAGGCCATGGAAGTGCAGGCCGTCATCACCCCGCTCAAGGACGCCGTCTATGGCGGCGGCGAACCCACGGGCGAGGCCCA TGCCCGCATGAAGGGCGGCATGTACCTGGCCGGCGTGATCGACGACGCCACCGTGCGCCCGCCCACCGAAGCGCCGAGCG CCAAGGAAATGGACGCGCTGCGCGCCGCCGTGAAGCAGGCCGGCCTGCTCCAGCGCTGA
Upstream 100 bases:
>100_bases TATTGGACGGCCGCGGGCGGGGCGGGAATCATCCGCTGCGCTCCCCTTCTTTCCAACGATCCAACGACGGGACCATCCCG GAACCACGGAGACAGCCCAC
Downstream 100 bases:
>100_bases ACAACAGCAGCTCCAGCACAAGGGCAGCGGATGAAAAGTCCGTTGTTCTACCGGTGGCCTCACAAGAAACAACGACAGCA ACCATCTTGAATGACTAGCT
Product: dihydrodipicolinate synthetase
Products: NA
Alternate protein names: N-acetylneuraminate pyruvate-lyase 2; N-acetylneuraminic acid aldolase 2; Sialate lyase 2; Sialic acid aldolase 2; Sialic acid lyase 2 [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPSIANYRGIIPAISCPFTPDHRIDEPALRKLASWLAGHDGVVAIMTNGHTGEVFSLTPAERAEVTRIVADELKGRCPVI SSIVCEGLKDAADHARAAVAAGAVALDVMPPHHWLRFGFTSGHALQYFEAIHQAAPEADLVCHVYPAWTRASYSSQLLAD LAKLPYLQAFKVGQRDMNKYARDIQAIREADASKAILTCHDEYLLASMVQGVDGALVGFATFIPQLIIDLWNAVKAGDLK KAMEVQAVITPLKDAVYGGGEPTGEAHARMKGGMYLAGVIDDATVRPPTEAPSAKEMDALRAAVKQAGLLQR
Sequences:
>Translated_312_residues MPSIANYRGIIPAISCPFTPDHRIDEPALRKLASWLAGHDGVVAIMTNGHTGEVFSLTPAERAEVTRIVADELKGRCPVI SSIVCEGLKDAADHARAAVAAGAVALDVMPPHHWLRFGFTSGHALQYFEAIHQAAPEADLVCHVYPAWTRASYSSQLLAD LAKLPYLQAFKVGQRDMNKYARDIQAIREADASKAILTCHDEYLLASMVQGVDGALVGFATFIPQLIIDLWNAVKAGDLK KAMEVQAVITPLKDAVYGGGEPTGEAHARMKGGMYLAGVIDDATVRPPTEAPSAKEMDALRAAVKQAGLLQR >Mature_311_residues PSIANYRGIIPAISCPFTPDHRIDEPALRKLASWLAGHDGVVAIMTNGHTGEVFSLTPAERAEVTRIVADELKGRCPVIS SIVCEGLKDAADHARAAVAAGAVALDVMPPHHWLRFGFTSGHALQYFEAIHQAAPEADLVCHVYPAWTRASYSSQLLADL AKLPYLQAFKVGQRDMNKYARDIQAIREADASKAILTCHDEYLLASMVQGVDGALVGFATFIPQLIIDLWNAVKAGDLKK AMEVQAVITPLKDAVYGGGEPTGEAHARMKGGMYLAGVIDDATVRPPTEAPSAKEMDALRAAVKQAGLLQR
Specific function: Catalyzes the cleavage of N-acetylneuraminic acid (sialic acid) to form pyruvate and N-acetylmannosamine via a Schiff base intermediate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHDPS family. NanA subfamily [H]
Homologues:
Organism=Homo sapiens, GI13540533, Length=313, Percent_Identity=25.2396166134185, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1786463, Length=248, Percent_Identity=26.6129032258064, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1789620, Length=302, Percent_Identity=22.8476821192053, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI87082415, Length=312, Percent_Identity=23.7179487179487, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002220 - InterPro: IPR020625 - InterPro: IPR020624 - InterPro: IPR005264 [H]
Pfam domain/function: PF00701 DHDPS [H]
EC number: =4.1.3.3 [H]
Molecular weight: Translated: 33516; Mature: 33385
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSIANYRGIIPAISCPFTPDHRIDEPALRKLASWLAGHDGVVAIMTNGHTGEVFSLTPA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCH ERAEVTRIVADELKGRCPVISSIVCEGLKDAADHARAAVAAGAVALDVMPPHHWLRFGFT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHEECCC SGHALQYFEAIHQAAPEADLVCHVYPAWTRASYSSQLLADLAKLPYLQAFKVGQRDMNKY CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ARDIQAIREADASKAILTCHDEYLLASMVQGVDGALVGFATFIPQLIIDLWNAVKAGDLK HHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KAMEVQAVITPLKDAVYGGGEPTGEAHARMKGGMYLAGVIDDATVRPPTEAPSAKEMDAL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHH RAAVKQAGLLQR HHHHHHHCCCCC >Mature Secondary Structure PSIANYRGIIPAISCPFTPDHRIDEPALRKLASWLAGHDGVVAIMTNGHTGEVFSLTPA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCH ERAEVTRIVADELKGRCPVISSIVCEGLKDAADHARAAVAAGAVALDVMPPHHWLRFGFT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHEECCC SGHALQYFEAIHQAAPEADLVCHVYPAWTRASYSSQLLADLAKLPYLQAFKVGQRDMNKY CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ARDIQAIREADASKAILTCHDEYLLASMVQGVDGALVGFATFIPQLIIDLWNAVKAGDLK HHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KAMEVQAVITPLKDAVYGGGEPTGEAHARMKGGMYLAGVIDDATVRPPTEAPSAKEMDAL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHH RAAVKQAGLLQR HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]