Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120610082

Identifier: 120610082

GI number: 120610082

Start: 1528782

End: 1529744

Strand: Direct

Name: 120610082

Synonym: Aave_1395

Alternate gene names: NA

Gene position: 1528782-1529744 (Clockwise)

Preceding gene: 120610080

Following gene: 120610083

Centisome position: 28.56

GC content: 69.57

Gene sequence:

>963_bases
ATGCAACGCAAGCACTTCCTCCGCGCCGCCCTGGCCGCCGCCGCCCTCGCGGCGGCGGCCGGCGCCATGGCGCAGACCTA
CCCCAACAAGCCCGTGCGGATGGTGATTCCCTTCCCGCCGGGCGGTACGCTCGACGCTGTCGGCCGCATGCTCGCGCAGA
AGCTCGGCGAGCAGACGGGCCAGTCCTTCGTCGTGGACAACAAGCCCGGCGGCAGCGGCGTGATCGGCGGCGACATCGTC
GCCAAGGCCCCGGCGGACGGCTACACCCTGCTGTTCAGCGCCTCCACGCACACCACGGCGCCGATGACGCTCAAGTCCGT
GCCCTACAACGTCACGCAGGATTTCATCCCCGTGGCCCTGGTCGCCAAGGCGCCGCTCTCGGTCGCGATCAACAAGGACC
TGCCCATCACCGACATCAAGAGCCTGCTCGCCTACGCCCAGGCGCGCCCCGGCAAGATGACCTTCGCCGTCGGCTCCATC
GGCTCGGCCGGCCATCTCTCCACCGAGCTGCTCAAGCGCGCCGGCAGGATCGACTACCTGGTCGTGCCGTACAAGGGCAC
GGCGCCGGCCTTCCAGGACCTGATCGGCGGGCAGATCGACGGCTTCATCGACCCCATCCTCGGCTCGCTCCAGTACCACA
AGAGCGGCATGCTGCGCGTGGTGGCCGTCACCTCGGCCCAGCGCGTGCCCAGCCTGCCGGACGTGCCCACCGTGGCCGAA
ACCATCCCCGGCTACGAGTTCTACAGCTGGTACGGCCTCTGGGCTCCGGCCAGGACCCCGCCCGCGCTCGTGCAGCGCCT
CAACGCCGAGGTCAACAAGGCCCTGGCCGAGATCGGCCCCAAGCTCAAGGAGCAGGGCCTGATCGTCACGCCCGGCAGCG
CGGAAGATTTCGCCAGGTTCCAGCGCGAGGACATGGAGCGCTCCCAGAAGATCGTGACCGAGGGCCGCATCCGTGCCGAG
TGA

Upstream 100 bases:

>100_bases
TGCGCGGCGGTGAGTCAACCCGTTCAGTGGCCAAGGCCGGCCGGCCTGCCTTGACGACTGAAGTTGGAACCAACTGAGAC
ATATAAGGAGACAAGACACC

Downstream 100 bases:

>100_bases
CGCGCTTCCAGCGGCCCGCCCCGTGCCCCATGCCGTCGTCACCGGCAGCAGCAGCGGCATCGGCCGCGCCATCGCCGAAT
CGCTGCTCGCCACCGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MQRKHFLRAALAAAALAAAAGAMAQTYPNKPVRMVIPFPPGGTLDAVGRMLAQKLGEQTGQSFVVDNKPGGSGVIGGDIV
AKAPADGYTLLFSASTHTTAPMTLKSVPYNVTQDFIPVALVAKAPLSVAINKDLPITDIKSLLAYAQARPGKMTFAVGSI
GSAGHLSTELLKRAGRIDYLVVPYKGTAPAFQDLIGGQIDGFIDPILGSLQYHKSGMLRVVAVTSAQRVPSLPDVPTVAE
TIPGYEFYSWYGLWAPARTPPALVQRLNAEVNKALAEIGPKLKEQGLIVTPGSAEDFARFQREDMERSQKIVTEGRIRAE

Sequences:

>Translated_320_residues
MQRKHFLRAALAAAALAAAAGAMAQTYPNKPVRMVIPFPPGGTLDAVGRMLAQKLGEQTGQSFVVDNKPGGSGVIGGDIV
AKAPADGYTLLFSASTHTTAPMTLKSVPYNVTQDFIPVALVAKAPLSVAINKDLPITDIKSLLAYAQARPGKMTFAVGSI
GSAGHLSTELLKRAGRIDYLVVPYKGTAPAFQDLIGGQIDGFIDPILGSLQYHKSGMLRVVAVTSAQRVPSLPDVPTVAE
TIPGYEFYSWYGLWAPARTPPALVQRLNAEVNKALAEIGPKLKEQGLIVTPGSAEDFARFQREDMERSQKIVTEGRIRAE
>Mature_320_residues
MQRKHFLRAALAAAALAAAAGAMAQTYPNKPVRMVIPFPPGGTLDAVGRMLAQKLGEQTGQSFVVDNKPGGSGVIGGDIV
AKAPADGYTLLFSASTHTTAPMTLKSVPYNVTQDFIPVALVAKAPLSVAINKDLPITDIKSLLAYAQARPGKMTFAVGSI
GSAGHLSTELLKRAGRIDYLVVPYKGTAPAFQDLIGGQIDGFIDPILGSLQYHKSGMLRVVAVTSAQRVPSLPDVPTVAE
TIPGYEFYSWYGLWAPARTPPALVQRLNAEVNKALAEIGPKLKEQGLIVTPGSAEDFARFQREDMERSQKIVTEGRIRAE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34022; Mature: 34022

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKHFLRAALAAAALAAAAGAMAQTYPNKPVRMVIPFPPGGTLDAVGRMLAQKLGEQTG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC
QSFVVDNKPGGSGVIGGDIVAKAPADGYTLLFSASTHTTAPMTLKSVPYNVTQDFIPVAL
CEEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHH
VAKAPLSVAINKDLPITDIKSLLAYAQARPGKMTFAVGSIGSAGHLSTELLKRAGRIDYL
HHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEE
VVPYKGTAPAFQDLIGGQIDGFIDPILGSLQYHKSGMLRVVAVTSAQRVPSLPDVPTVAE
EEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCHHHH
TIPGYEFYSWYGLWAPARTPPALVQRLNAEVNKALAEIGPKLKEQGLIVTPGSAEDFARF
HCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCEEECCCCHHHHHHH
QREDMERSQKIVTEGRIRAE
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRKHFLRAALAAAALAAAAGAMAQTYPNKPVRMVIPFPPGGTLDAVGRMLAQKLGEQTG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC
QSFVVDNKPGGSGVIGGDIVAKAPADGYTLLFSASTHTTAPMTLKSVPYNVTQDFIPVAL
CEEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHH
VAKAPLSVAINKDLPITDIKSLLAYAQARPGKMTFAVGSIGSAGHLSTELLKRAGRIDYL
HHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEE
VVPYKGTAPAFQDLIGGQIDGFIDPILGSLQYHKSGMLRVVAVTSAQRVPSLPDVPTVAE
EEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCHHHH
TIPGYEFYSWYGLWAPARTPPALVQRLNAEVNKALAEIGPKLKEQGLIVTPGSAEDFARF
HCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCEEECCCCHHHHHHH
QREDMERSQKIVTEGRIRAE
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]