Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610073
Identifier: 120610073
GI number: 120610073
Start: 1520294
End: 1521379
Strand: Reverse
Name: 120610073
Synonym: Aave_1386
Alternate gene names: NA
Gene position: 1521379-1520294 (Counterclockwise)
Preceding gene: 120610074
Following gene: 120610068
Centisome position: 28.42
GC content: 70.99
Gene sequence:
>1086_bases GTGAAACTTTCCCGTTACCTGCTGGGCCTGGCGCCCGCAGCCGCCCTCTTCCTGGCCGCCTGCGGAGGCGGCAGCGACCC GGCCCCCCTCGCCACCGCGTTCACGGCGCGCACCGTGGTGTCCGACGGCAGCGTGCCCTCCACGCAGACGGACCCCAACC TCAAGAACGGCTGGGGCATCGCCTTCAACCCGCAGGGCTTCGTGTGGGTGACGGCCACCGCCACCCAGAAATCCACGCTC TACGACGGCAACGGCGTACCGCAGTCGCTGGTGGTCACGGTCCCCCCCGCGGGCAGCGCGCCGGCCAACCCGACCGGCAT CGTATTCAGCGGCGGCAGCGACTTCCAGGTCACCAAGGACGGCGTGACCGGTCCGAGCCGTTTCATCTTCTCGAGCGAGG ACGGCAGCATCGCCGGCTGGAGTCCCGCCGCGGACCTGAACAATGCCATCGTCACCTACAGCGACGGCGCGGGCGGCGCG GTGTACAAGGGCCTGGCCATCGCCGCCAGCGGCAATGCCAACTTCCTCTACGCCACCGACTTCCGCAACCGCAAGGTGGA CGTGTTCGACGGCAGCTTCCGCAAGGTCCGCCTGGCCGGTGACTTCTCCGACACGCAACTGCCTGCCGACTACGCTCCCT ACGGCATCCAGGCCATCGGCTCACGCATCGTGGTGACCTATGCGCGCCAGGACGCCAGCCGCCGCAACGCCGTGCACGGC GACGCCACGGGCGCGGTGAACGTGTTCAATGCCGACGGCACGCTGGCCCAGCGCCTGCTGCCGCCCGGCGCCCCCCTGAA TGCGCCCTGGGGCGTGGCCCTGGCGCCCGCGGACTTCGGCGGCGCCTCCGGCCGTCTGCTGATCGCCAACGAGGGCGACG GCACCATCGGCGCGTTCGACCTGGCCACCGGCCTCTCGAAGGGCGTGCTCGCCCAGCGCGACGGCACCGTGCTGCGCGTG GACGGCCTGCGCGGCATCGCGTTCGGCAACGGGCTGAACCAGCAGCCGCTCAACACGCTGTTCTACATCGCCGGGCCGAA CCAGGGCGCCAACGGCGCCTACGGCCGGGTGGACCTGCAGAACTGA
Upstream 100 bases:
>100_bases CCCGGCCGCCATGCCGTGCATTCCGCAGCACGGCAACCTTTGCGCCGGCCACGGGCACCCACCACGCGCAGAACGTCCTG CCAACCCGTGGAGTCTTTTC
Downstream 100 bases:
>100_bases CCTGGGGGAAACCGCCGGGCGGGACGCCGGCCTTCAGCCGAACAGCGCGTCCTGCAGCCGGCGGTACTTTTCCTCGCCGA CCAGCTCGCGGATCTTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MKLSRYLLGLAPAAALFLAACGGGSDPAPLATAFTARTVVSDGSVPSTQTDPNLKNGWGIAFNPQGFVWVTATATQKSTL YDGNGVPQSLVVTVPPAGSAPANPTGIVFSGGSDFQVTKDGVTGPSRFIFSSEDGSIAGWSPAADLNNAIVTYSDGAGGA VYKGLAIAASGNANFLYATDFRNRKVDVFDGSFRKVRLAGDFSDTQLPADYAPYGIQAIGSRIVVTYARQDASRRNAVHG DATGAVNVFNADGTLAQRLLPPGAPLNAPWGVALAPADFGGASGRLLIANEGDGTIGAFDLATGLSKGVLAQRDGTVLRV DGLRGIAFGNGLNQQPLNTLFYIAGPNQGANGAYGRVDLQN
Sequences:
>Translated_361_residues MKLSRYLLGLAPAAALFLAACGGGSDPAPLATAFTARTVVSDGSVPSTQTDPNLKNGWGIAFNPQGFVWVTATATQKSTL YDGNGVPQSLVVTVPPAGSAPANPTGIVFSGGSDFQVTKDGVTGPSRFIFSSEDGSIAGWSPAADLNNAIVTYSDGAGGA VYKGLAIAASGNANFLYATDFRNRKVDVFDGSFRKVRLAGDFSDTQLPADYAPYGIQAIGSRIVVTYARQDASRRNAVHG DATGAVNVFNADGTLAQRLLPPGAPLNAPWGVALAPADFGGASGRLLIANEGDGTIGAFDLATGLSKGVLAQRDGTVLRV DGLRGIAFGNGLNQQPLNTLFYIAGPNQGANGAYGRVDLQN >Mature_361_residues MKLSRYLLGLAPAAALFLAACGGGSDPAPLATAFTARTVVSDGSVPSTQTDPNLKNGWGIAFNPQGFVWVTATATQKSTL YDGNGVPQSLVVTVPPAGSAPANPTGIVFSGGSDFQVTKDGVTGPSRFIFSSEDGSIAGWSPAADLNNAIVTYSDGAGGA VYKGLAIAASGNANFLYATDFRNRKVDVFDGSFRKVRLAGDFSDTQLPADYAPYGIQAIGSRIVVTYARQDASRRNAVHG DATGAVNVFNADGTLAQRLLPPGAPLNAPWGVALAPADFGGASGRLLIANEGDGTIGAFDLATGLSKGVLAQRDGTVLRV DGLRGIAFGNGLNQQPLNTLFYIAGPNQGANGAYGRVDLQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36918; Mature: 36918
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSRYLLGLAPAAALFLAACGGGSDPAPLATAFTARTVVSDGSVPSTQTDPNLKNGWGI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCEE AFNPQGFVWVTATATQKSTLYDGNGVPQSLVVTVPPAGSAPANPTGIVFSGGSDFQVTKD EECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEC GVTGPSRFIFSSEDGSIAGWSPAADLNNAIVTYSDGAGGAVYKGLAIAASGNANFLYATD CCCCCCEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEEEEEC FRNRKVDVFDGSFRKVRLAGDFSDTQLPADYAPYGIQAIGSRIVVTYARQDASRRNAVHG CCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCHHCCCCCC DATGAVNVFNADGTLAQRLLPPGAPLNAPWGVALAPADFGGASGRLLIANEGDGTIGAFD CCCCEEEEEECCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEHH LATGLSKGVLAQRDGTVLRVDGLRGIAFGNGLNQQPLNTLFYIAGPNQGANGAYGRVDLQ HHHCCCCCEEEECCCCEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEC N C >Mature Secondary Structure MKLSRYLLGLAPAAALFLAACGGGSDPAPLATAFTARTVVSDGSVPSTQTDPNLKNGWGI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCEE AFNPQGFVWVTATATQKSTLYDGNGVPQSLVVTVPPAGSAPANPTGIVFSGGSDFQVTKD EECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEC GVTGPSRFIFSSEDGSIAGWSPAADLNNAIVTYSDGAGGAVYKGLAIAASGNANFLYATD CCCCCCEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEEEEEC FRNRKVDVFDGSFRKVRLAGDFSDTQLPADYAPYGIQAIGSRIVVTYARQDASRRNAVHG CCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCHHCCCCCC DATGAVNVFNADGTLAQRLLPPGAPLNAPWGVALAPADFGGASGRLLIANEGDGTIGAFD CCCCEEEEEECCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEHH LATGLSKGVLAQRDGTVLRVDGLRGIAFGNGLNQQPLNTLFYIAGPNQGANGAYGRVDLQ HHHCCCCCEEEECCCCEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA