Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is ydiA [C]

Identifier: 120610068

GI number: 120610068

Start: 1513745

End: 1514566

Strand: Reverse

Name: ydiA [C]

Synonym: Aave_1381

Alternate gene names: 120610068

Gene position: 1514566-1513745 (Counterclockwise)

Preceding gene: 120610073

Following gene: 120610066

Centisome position: 28.29

GC content: 65.82

Gene sequence:

>822_bases
ATGCACACGCGCACCGTATTCTTCATCTCCGACGGCACCGGCATCACCGCCGAAACCTTCGGCAACGCCATCCTGGCGCA
GTTCGACATCAAGCCGCGCCATGTGCGCCTGCCCTTCATCGACACCGAGGACAAGGCCCACCAGGCCGTGCGCCGCATCA
ACCACACGGCCGAGCTGGAGGGCAAGAAGCCCATCGTGTTCACCACGCTGGTCAACATGAGCGTGCTGCGCATCATCCAG
GAGAACTGCCAGGGCATGCTGCTGGACATGTTCGGCACCTTCATCCGCCCGCTGGAGGGCGAACTCGGCATCAAGTCGCT
GCACCGCGTGGGCCGCTTCGCGGACGTGAGCCTGAGCAAGGAATACACCGACCGCATCGAGGCCATCAACTTCAGCCTGG
ACCACGACGACGGCCAGAGCCACCGCGACCTGAGCGGCGCGGACGTGATCCTGGTGGGCGTGTCGCGCAGCGGCAAGACC
CCCACCAGCCTCTACCTGGCCATGCAGTGCGGCCTGAAGGTGGCCAACTACCCGCTCATCCCCGAGGATTTCGAGCGCAA
GCAATTGCCGCCCGCGCTGGAGCCGCACCGCAAGAAGATCTTCGGCCTGACCATCCTGCCCGAGCGGCTCTCGCAGATCC
GCAACGAACGCCGGCCGGGCTCGAAATACGCCGACCTCGCCAACTGCCGCCACGAGGTGGCCGAGGCCGAGGCGATGATG
CGGCGCTCGGGCATCCGGTGGCTCTCGACCACCACGAAGAGCATCGAGGAGATCGCGACGACGATCCTGCAGGAGGTGCG
GCCGGAGCGGCTGGTGTATTGA

Upstream 100 bases:

>100_bases
AGGGCGGCCGGCCGCAAGGCGCTTGTGGGACACGGCCGGCCTCCGGTCCAGCCAGCAGCCCACCCAGCGAACGATCACCG
CGGAAAGCCCCGACCCCTCC

Downstream 100 bases:

>100_bases
TCCCCGCCGTCAGTCCTCGTCCTCCACCAGCAGGCAGGTGGCCACGGCGGGGCACACCACCAGCACCGCCGCGCTGAACG
TCGCGGAGGTGAGCGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELEGKKPIVFTTLVNMSVLRIIQ
ENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSKEYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKT
PTSLYLAMQCGLKVANYPLIPEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM
RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY

Sequences:

>Translated_273_residues
MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELEGKKPIVFTTLVNMSVLRIIQ
ENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSKEYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKT
PTSLYLAMQCGLKVANYPLIPEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM
RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY
>Mature_273_residues
MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELEGKKPIVFTTLVNMSVLRIIQ
ENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSKEYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKT
PTSLYLAMQCGLKVANYPLIPEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM
RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=273, Percent_Identity=45.0549450549451, Blast_Score=231, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 30910; Mature: 30910

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELE
CCCEEEEEEECCCCCCHHHHCCEEEEEECCCCCEEECCEECCCHHHHHHHHHHCCHHHCC
GKKPIVFTTLVNMSVLRIIQENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHCCCCCH
EYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKTPTSLYLAMQCGLKVANYPLI
HHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEECCCCCC
PEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM
CCCHHHHCCCCCCCCHHHHHCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MHTRTVFFISDGTGITAETFGNAILAQFDIKPRHVRLPFIDTEDKAHQAVRRINHTAELE
CCCEEEEEEECCCCCCHHHHCCEEEEEECCCCCEEECCEECCCHHHHHHHHHHCCHHHCC
GKKPIVFTTLVNMSVLRIIQENCQGMLLDMFGTFIRPLEGELGIKSLHRVGRFADVSLSK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHCCCCCH
EYTDRIEAINFSLDHDDGQSHRDLSGADVILVGVSRSGKTPTSLYLAMQCGLKVANYPLI
HHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEECCCCCC
PEDFERKQLPPALEPHRKKIFGLTILPERLSQIRNERRPGSKYADLANCRHEVAEAEAMM
CCCHHHHCCCCCCCCHHHHHCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RRSGIRWLSTTTKSIEEIATTILQEVRPERLVY
HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA