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The map label for this gene is 120610023

Identifier: 120610023

GI number: 120610023

Start: 1460652

End: 1461746

Strand: Reverse

Name: 120610023

Synonym: Aave_1336

Alternate gene names: NA

Gene position: 1461746-1460652 (Counterclockwise)

Preceding gene: 120610024

Following gene: 120610022

Centisome position: 27.31

GC content: 69.32

Gene sequence:

>1095_bases
GTGAACGCTATCAATCGCCTGGGCCTCCTGGGCCTTGCCATGGCCTTGTCCGCCTGCTCCACCTCCATCCTGGACAACGA
CAAGATCGACTACAAGAGCGCCACCAAGGGCTCGACGCTCGAAGTGCCGCCCGACCTGACCCAGCTCTCGCGCGATTCGC
GCTACACGGTCCCGGGCGGCGTGGTGTCGGCCGCGGCCTTCGAGGCCGGCCAGGCGCAGAAGCAGCCCGGCACGGTCAAT
GCCGCAGCCAGGTCGCTGGGCGACGTGCGCATCGAGCGCGACGGCAACCAGCGCTGGCTGGTGGTGAAACGCCCCGCCGA
CGCGCTGTGGGAGCCGGTGCGCGACTTCTGGAACGAGAACGGCTTCGTGCTCACGATCGACCAGCCCAACCTCGGCATCA
TGGAAACCGACTGGGCCGAGAACCGCGCCAAGCTGCCGCAGGACATCATCCGCTCCACCATCGGCAAGATCTTCGATTCC
GTCTACTCCACCGGCGAGCGCGACAAGTTCCGCACCCGCCTGGAGCGCGGCGCCGACGGCTCCACCGAGATCTACATCAG
CCACCGCGGCATGGTCGAGGTCTACAGCACCGCCCAGAAGGACAACACCGTCTGGCAGCCCCGCCCGGCCGATCCGGAAC
TGGAAACCGAATTCCTGCGCCGCCTGATGGTCAAGCTCGGCGTGAGCCAGGAGGAGTCCCGCGCCGTGGCGGCCGCCCCC
ATCCAGCCGCCGCCGACCGCGCGCATCGGCCGCATGGGCAACGCGCCCGTGGTGGAGCTCGACGAGAGCTTCGACCGCGC
ATGGCGCCGCGTCGGGCTGGCGCTCGATCGCACGGGCTTCACCGTCGAGGAGCGCGACCGCGCCCAGGGGGTGTACTCCG
TGCGCTACGTCGAGCCCACCGAGAAGAAGGATCCCGGATTCTTCGCCAAGCTGCTGGGCCGCTCGGCCGACGCCGCGCCG
CCCGTCAAGTACCGCATCCAGGTGCGCACCGAAGGTGGCAGGAGCACGGTCGCGGTGCTCAATGCCGCGGGCGCACCCGA
GAGCTCGGCCAACGCGGACCGCATCGTCCGCGTGCTCGCCGACGATCTGAAGTGA

Upstream 100 bases:

>100_bases
CTGCGCTCCGCTGGCCTGCTCTGAAGCACGTCCGCCTCCGCCTGCGCCCGTCTTTCCCCACCGCAGCCAGCCTCCAGAGA
CTCCCTCAAAGGATTTTTGC

Downstream 100 bases:

>100_bases
CCGGCGCTGCCGCCCGCTGAGGAGCGACGGACCGCGTGCTGCGCTTCAAGAACCTGGGCAGCGGCAGCTCGGGCAACGCC
ACCGTCGTCGAAGGGCGCTG

Product: NlpB/DapX family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNAINRLGLLGLAMALSACSTSILDNDKIDYKSATKGSTLEVPPDLTQLSRDSRYTVPGGVVSAAAFEAGQAQKQPGTVN
AAARSLGDVRIERDGNQRWLVVKRPADALWEPVRDFWNENGFVLTIDQPNLGIMETDWAENRAKLPQDIIRSTIGKIFDS
VYSTGERDKFRTRLERGADGSTEIYISHRGMVEVYSTAQKDNTVWQPRPADPELETEFLRRLMVKLGVSQEESRAVAAAP
IQPPPTARIGRMGNAPVVELDESFDRAWRRVGLALDRTGFTVEERDRAQGVYSVRYVEPTEKKDPGFFAKLLGRSADAAP
PVKYRIQVRTEGGRSTVAVLNAAGAPESSANADRIVRVLADDLK

Sequences:

>Translated_364_residues
MNAINRLGLLGLAMALSACSTSILDNDKIDYKSATKGSTLEVPPDLTQLSRDSRYTVPGGVVSAAAFEAGQAQKQPGTVN
AAARSLGDVRIERDGNQRWLVVKRPADALWEPVRDFWNENGFVLTIDQPNLGIMETDWAENRAKLPQDIIRSTIGKIFDS
VYSTGERDKFRTRLERGADGSTEIYISHRGMVEVYSTAQKDNTVWQPRPADPELETEFLRRLMVKLGVSQEESRAVAAAP
IQPPPTARIGRMGNAPVVELDESFDRAWRRVGLALDRTGFTVEERDRAQGVYSVRYVEPTEKKDPGFFAKLLGRSADAAP
PVKYRIQVRTEGGRSTVAVLNAAGAPESSANADRIVRVLADDLK
>Mature_364_residues
MNAINRLGLLGLAMALSACSTSILDNDKIDYKSATKGSTLEVPPDLTQLSRDSRYTVPGGVVSAAAFEAGQAQKQPGTVN
AAARSLGDVRIERDGNQRWLVVKRPADALWEPVRDFWNENGFVLTIDQPNLGIMETDWAENRAKLPQDIIRSTIGKIFDS
VYSTGERDKFRTRLERGADGSTEIYISHRGMVEVYSTAQKDNTVWQPRPADPELETEFLRRLMVKLGVSQEESRAVAAAP
IQPPPTARIGRMGNAPVVELDESFDRAWRRVGLALDRTGFTVEERDRAQGVYSVRYVEPTEKKDPGFFAKLLGRSADAAP
PVKYRIQVRTEGGRSTVAVLNAAGAPESSANADRIVRVLADDLK

Specific function: Unknown

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40072; Mature: 40072

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAINRLGLLGLAMALSACSTSILDNDKIDYKSATKGSTLEVPPDLTQLSRDSRYTVPGG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCCC
VVSAAAFEAGQAQKQPGTVNAAARSLGDVRIERDGNQRWLVVKRPADALWEPVRDFWNEN
HHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECCCEEEEEEECCHHHHHHHHHHHHCCC
GFVLTIDQPNLGIMETDWAENRAKLPQDIIRSTIGKIFDSVYSTGERDKFRTRLERGADG
CEEEEECCCCCCEEECCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
STEIYISHRGMVEVYSTAQKDNTVWQPRPADPELETEFLRRLMVKLGVSQEESRAVAAAP
CEEEEEECCCEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECC
IQPPPTARIGRMGNAPVVELDESFDRAWRRVGLALDRTGFTVEERDRAQGVYSVRYVEPT
CCCCCCHHHCCCCCCCEEECHHHHHHHHHHHCCEECCCCCCCHHHHHCCCEEEEEEECCC
EKKDPGFFAKLLGRSADAAPPVKYRIQVRTEGGRSTVAVLNAAGAPESSANADRIVRVLA
CCCCCCHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHH
DDLK
HHCC
>Mature Secondary Structure
MNAINRLGLLGLAMALSACSTSILDNDKIDYKSATKGSTLEVPPDLTQLSRDSRYTVPGG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCCC
VVSAAAFEAGQAQKQPGTVNAAARSLGDVRIERDGNQRWLVVKRPADALWEPVRDFWNEN
HHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECCCEEEEEEECCHHHHHHHHHHHHCCC
GFVLTIDQPNLGIMETDWAENRAKLPQDIIRSTIGKIFDSVYSTGERDKFRTRLERGADG
CEEEEECCCCCCEEECCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
STEIYISHRGMVEVYSTAQKDNTVWQPRPADPELETEFLRRLMVKLGVSQEESRAVAAAP
CEEEEEECCCEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECC
IQPPPTARIGRMGNAPVVELDESFDRAWRRVGLALDRTGFTVEERDRAQGVYSVRYVEPT
CCCCCCHHHCCCCCCCEEECHHHHHHHHHHHCCEECCCCCCCHHHHHCCCEEEEEEECCC
EKKDPGFFAKLLGRSADAAPPVKYRIQVRTEGGRSTVAVLNAAGAPESSANADRIVRVLA
CCCCCCHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHH
DDLK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]