Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yycJ [H]

Identifier: 120610022

GI number: 120610022

Start: 1459840

End: 1460616

Strand: Reverse

Name: yycJ [H]

Synonym: Aave_1335

Alternate gene names: 120610022

Gene position: 1460616-1459840 (Counterclockwise)

Preceding gene: 120610023

Following gene: 120610021

Centisome position: 27.29

GC content: 71.43

Gene sequence:

>777_bases
GTGCTGCGCTTCAAGAACCTGGGCAGCGGCAGCTCGGGCAACGCCACCGTCGTCGAAGGGCGCTGCGGCACGCAGGTACG
GCGCCTGCTCGTCGATTGCGGACTGGGGCCGCGCCAGCTGGCCGGCCGGCTCGGCGAGGCCGGCCTCGCGATCGACGACA
TCGACGCGATCTTCATCACGCACGAGCATTCCGACCACGTGGGCGGCCTGCAGAAGGTCGCCCTGCGCCACCGCATTCCG
GCCTGGATGAGCCACGGTACCTACACGGCCATCGGCGCGCCGGACCTGGACGGGTTGCTGCACCTCACTGCGGACGGCGA
ATCCATCGATCTGGGTGCTTTCGAGGCACGCCCCTTCACCGTGCCGCACGATGCGCGCGAGCCGCTGCACCTGCGCTGCA
GCGACGGAGCCACCCACATCGGGCTGCTGACGGACCTGGGCCACGCCACCGAGCACGTGCTCGCCCATCTGCGCGGCTGC
CATGCGCTGCTGCTGGAGAGCAACCACGACCGCGAGATGCTCTCCGTCTCCAGCTACCCCGCCTTCCTGAAGCGGCGCAT
CGGCGGCGCCTATGGCCATCTTGGCAACCACGTGGCGGCGGAGATCCTGCGCGCCGTACGGCACGACGGCCTGCGCAGCG
TGGCAGCGGCCCACCTCAGTGCCCAGAACAACCGCCCGGACCTCGCCCGCGCTGCGCTCGCCGAAGCCATCGGCTGGGAG
CCGGCCCGGATCGAGGTGGCGGACCCGCGCAGCGGCACCGGCTGGATCGGCGGGTGA

Upstream 100 bases:

>100_bases
GCGCACCCGAGAGCTCGGCCAACGCGGACCGCATCGTCCGCGTGCTCGCCGACGATCTGAAGTGACCGGCGCTGCCGCCC
GCTGAGGAGCGACGGACCGC

Downstream 100 bases:

>100_bases
ACTCCACCCTTTCCTGACCGTCTGCACCACTCGCCTGGCCCGCTCCGTGGCCATGGGCAGCGCAAGGCGCGCCTGTTCTG
CAGCCTGCACGCGCGGTGCG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLRFKNLGSGSSGNATVVEGRCGTQVRRLLVDCGLGPRQLAGRLGEAGLAIDDIDAIFITHEHSDHVGGLQKVALRHRIP
AWMSHGTYTAIGAPDLDGLLHLTADGESIDLGAFEARPFTVPHDAREPLHLRCSDGATHIGLLTDLGHATEHVLAHLRGC
HALLLESNHDREMLSVSSYPAFLKRRIGGAYGHLGNHVAAEILRAVRHDGLRSVAAAHLSAQNNRPDLARAALAEAIGWE
PARIEVADPRSGTGWIGG

Sequences:

>Translated_258_residues
MLRFKNLGSGSSGNATVVEGRCGTQVRRLLVDCGLGPRQLAGRLGEAGLAIDDIDAIFITHEHSDHVGGLQKVALRHRIP
AWMSHGTYTAIGAPDLDGLLHLTADGESIDLGAFEARPFTVPHDAREPLHLRCSDGATHIGLLTDLGHATEHVLAHLRGC
HALLLESNHDREMLSVSSYPAFLKRRIGGAYGHLGNHVAAEILRAVRHDGLRSVAAAHLSAQNNRPDLARAALAEAIGWE
PARIEVADPRSGTGWIGG
>Mature_258_residues
MLRFKNLGSGSSGNATVVEGRCGTQVRRLLVDCGLGPRQLAGRLGEAGLAIDDIDAIFITHEHSDHVGGLQKVALRHRIP
AWMSHGTYTAIGAPDLDGLLHLTADGESIDLGAFEARPFTVPHDAREPLHLRCSDGATHIGLLTDLGHATEHVLAHLRGC
HALLLESNHDREMLSVSSYPAFLKRRIGGAYGHLGNHVAAEILRAVRHDGLRSVAAAHLSAQNNRPDLARAALAEAIGWE
PARIEVADPRSGTGWIGG

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 27526; Mature: 27526

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFKNLGSGSSGNATVVEGRCGTQVRRLLVDCGLGPRQLAGRLGEAGLAIDDIDAIFIT
CCEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCEEEEEE
HEHSDHVGGLQKVALRHRIPAWMSHGTYTAIGAPDLDGLLHLTADGESIDLGAFEARPFT
ECCCCHHHHHHHHHHHHHCHHHHCCCCEEEECCCCCCCEEEEEECCCEEECCCCCCCCCC
VPHDAREPLHLRCSDGATHIGLLTDLGHATEHVLAHLRGCHALLLESNHDREMLSVSSYP
CCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHH
AFLKRRIGGAYGHLGNHVAAEILRAVRHDGLRSVAAAHLSAQNNRPDLARAALAEAIGWE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PARIEVADPRSGTGWIGG
CCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLRFKNLGSGSSGNATVVEGRCGTQVRRLLVDCGLGPRQLAGRLGEAGLAIDDIDAIFIT
CCEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCEEEEEE
HEHSDHVGGLQKVALRHRIPAWMSHGTYTAIGAPDLDGLLHLTADGESIDLGAFEARPFT
ECCCCHHHHHHHHHHHHHCHHHHCCCCEEEECCCCCCCEEEEEECCCEEECCCCCCCCCC
VPHDAREPLHLRCSDGATHIGLLTDLGHATEHVLAHLRGCHALLLESNHDREMLSVSSYP
CCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHH
AFLKRRIGGAYGHLGNHVAAEILRAVRHDGLRSVAAAHLSAQNNRPDLARAALAEAIGWE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PARIEVADPRSGTGWIGG
CCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]