Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610021
Identifier: 120610021
GI number: 120610021
Start: 1459199
End: 1459744
Strand: Reverse
Name: 120610021
Synonym: Aave_1334
Alternate gene names: NA
Gene position: 1459744-1459199 (Counterclockwise)
Preceding gene: 120610022
Following gene: 120610018
Centisome position: 27.27
GC content: 67.03
Gene sequence:
>546_bases GTGCGTCGGCACAAAAAAAGCCCCGTCCTTGCGGTACGGGGCTTTCGTGCCGGGCCTTTCGCCGCAGGCTGGTGGCCCGG CGGCGAAAGGCGATATGGCAGCTTACTTGGCGGCGGAAGCACCACCTGCAGCAGCAGCTGCAGCGGCGTCTGCAGCGGCC TTGGCGGCATCGCTGGCGGGAGCGGAGGCTTCGGCAGCAGCGGCTGCGGCAGGAGCCGAAGCGTCGGAAGCAGGAGCTTC GGCCGGTGCGGGCACGGGAGCGGGAGCCGGGGCCGGAGCTTCGACGGGAGCCGGGGCCGGAGCCGGGGCTTCTTCCTTCT TGCCGCAGGCGGCGAGAGCGACGGACGCGACCAGGGCAGCCAGAACGAGAGAGTTCTTCATTTCGGTTTTTTCCTATGGG ACAGACGGATCTTGGAATTTTGCCGCCACGCCGCCCTCTTTCAGCGATGCGCTTTGGCCGGGCGCGGTGCACCCCGTGGC GCTTGGAGCGCACGGAGCGCTCCCAGACATCAATCGCAAATTATAGGGAGGTTGCGTCAATCCTGA
Upstream 100 bases:
>100_bases GGTGAACTCCACCCTTTCCTGACCGTCTGCACCACTCGCCTGGCCCGCTCCGTGGCCATGGGCAGCGCAAGGCGCGCCTG TTCTGCAGCCTGCACGCGCG
Downstream 100 bases:
>100_bases CTAATACCGACAGCACGGGCTGAACGATGTCACAGTCCGAGCGTCGTCGCGGAAAAAGCAGGCGTGCTGCGCCGCAGCCA TTCATCCAGCACCTGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRRHKKSPVLAVRGFRAGPFAAGWWPGGERRYGSLLGGGSTTCSSSCSGVCSGLGGIAGGSGGFGSSGCGRSRSVGSRSF GRCGHGSGSRGRSFDGSRGRSRGFFLLAAGGESDGRDQGSQNERVLHFGFFLWDRRILEFCRHAALFQRCALAGRGAPRG AWSARSAPRHQSQIIGRLRQS
Sequences:
>Translated_181_residues MRRHKKSPVLAVRGFRAGPFAAGWWPGGERRYGSLLGGGSTTCSSSCSGVCSGLGGIAGGSGGFGSSGCGRSRSVGSRSF GRCGHGSGSRGRSFDGSRGRSRGFFLLAAGGESDGRDQGSQNERVLHFGFFLWDRRILEFCRHAALFQRCALAGRGAPRG AWSARSAPRHQSQIIGRLRQS >Mature_181_residues MRRHKKSPVLAVRGFRAGPFAAGWWPGGERRYGSLLGGGSTTCSSSCSGVCSGLGGIAGGSGGFGSSGCGRSRSVGSRSF GRCGHGSGSRGRSFDGSRGRSRGFFLLAAGGESDGRDQGSQNERVLHFGFFLWDRRILEFCRHAALFQRCALAGRGAPRG AWSARSAPRHQSQIIGRLRQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19057; Mature: 19057
Theoretical pI: Translated: 12.27; Mature: 12.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHKKSPVLAVRGFRAGPFAAGWWPGGERRYGSLLGGGSTTCSSSCSGVCSGLGGIAGG CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC SGGFGSSGCGRSRSVGSRSFGRCGHGSGSRGRSFDGSRGRSRGFFLLAAGGESDGRDQGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC QNERVLHFGFFLWDRRILEFCRHAALFQRCALAGRGAPRGAWSARSAPRHQSQIIGRLRQ CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC S C >Mature Secondary Structure MRRHKKSPVLAVRGFRAGPFAAGWWPGGERRYGSLLGGGSTTCSSSCSGVCSGLGGIAGG CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC SGGFGSSGCGRSRSVGSRSFGRCGHGSGSRGRSFDGSRGRSRGFFLLAAGGESDGRDQGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC QNERVLHFGFFLWDRRILEFCRHAALFQRCALAGRGAPRGAWSARSAPRHQSQIIGRLRQ CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA