Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609999
Identifier: 120609999
GI number: 120609999
Start: 1439168
End: 1440130
Strand: Direct
Name: 120609999
Synonym: Aave_1312
Alternate gene names: NA
Gene position: 1439168-1440130 (Clockwise)
Preceding gene: 120609998
Following gene: 120610000
Centisome position: 26.89
GC content: 63.86
Gene sequence:
>963_bases ATGCATCGTCGAAATTGGTTCGGATTCGTGCTTCTTGCTGCCGCGGGCGGTGCCTGGGCCCAGGCCTATCCCTCCAAACC CATCCGTCTGGTCGTACCTTTCGCGCCGGGAGGCACCACCGACATCATCGCGCGTGTGATAGCAGACCCCTTGTCACGTG CGCTGGGGCAGCCGGTGGTGGTGGAAAACAAGGCCGGCGGCGGCGGCATCGTCGGCGCTTCCGAAACAGCCAAGGCGGTG CCGGACGGGTACTCGCTGGGCATCGCCACCGTGTCCACCACGGCCGCCAATCCCGCGATCAATCCGCGCACGCCCTACAA CCCGCTGACGGATTTCACGCCGATCATCAATATCGCCGCCACGCCCAACATCATCGCGGTGAATCCCAATTTCCCGGCCA AGGACTACAAGGGCTTCGTCGCGGAAGTCAAGAAGGTTCCGGGCAAGTACTCTTATTCGTCCTCCGGCACCGGCGGGATC GGTCATCTGCAGATGGAGCTCTACAAGAGCCTGACGCAGATCTTCGTCACGCACATCCCCTACCGCGGCGCAGGGCCGGC ACTGAACGATACCGTGGCCGGCCAGGTGCCGATCATCTTCGACAATCTCCCATCCACGCTGCCCTTCATCAAGGAGAACC GCCTGGTGCCCATCGTCGTGGCCGCGCCGCAACGCGTCGCCGCGCTGCCGAATGTCCCGACCTTCAAGGAGATCGGGCTG GAGCCGGTGAACCGCATGGCGTACTACGGCATCCTCGGCCCGAAGGGCCTGCCGCGGGACGTGGTGGACAAGGTCAATGC GGGCGTGCGCAAGGCGCTGGAGGATCCGGCCGTGCGCAAGCGCATCGAGGACACGGGTTCGCTGATCGTCGGCAACACGC CCGATCAGTTCGCCGAGCAGATCAAGGCGGAGTTCGATGTTTACAAGGCGGTGGTGCAGAAGCAGAAGCTTTCGCTCGAG TGA
Upstream 100 bases:
>100_bases AGGGTAATTCCTCACCAGGAGTGACGCTGCGTGCAACGATGCTCATGGCTTCCCCGTTCGTGGGGCTACATCGTTTTCAT GCAGTTACAAAGGGATTGCC
Downstream 100 bases:
>100_bases CCTGCCGCCCGGCCGTCCGGGCGGGCGGCATCAGGATCCGGGGACGCGTGTTAACTTCGCGCCCCATGACCCTTTCGCCC GGCAGTCAGGCTGCCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MHRRNWFGFVLLAAAGGAWAQAYPSKPIRLVVPFAPGGTTDIIARVIADPLSRALGQPVVVENKAGGGGIVGASETAKAV PDGYSLGIATVSTTAANPAINPRTPYNPLTDFTPIINIAATPNIIAVNPNFPAKDYKGFVAEVKKVPGKYSYSSSGTGGI GHLQMELYKSLTQIFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSTLPFIKENRLVPIVVAAPQRVAALPNVPTFKEIGL EPVNRMAYYGILGPKGLPRDVVDKVNAGVRKALEDPAVRKRIEDTGSLIVGNTPDQFAEQIKAEFDVYKAVVQKQKLSLE
Sequences:
>Translated_320_residues MHRRNWFGFVLLAAAGGAWAQAYPSKPIRLVVPFAPGGTTDIIARVIADPLSRALGQPVVVENKAGGGGIVGASETAKAV PDGYSLGIATVSTTAANPAINPRTPYNPLTDFTPIINIAATPNIIAVNPNFPAKDYKGFVAEVKKVPGKYSYSSSGTGGI GHLQMELYKSLTQIFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSTLPFIKENRLVPIVVAAPQRVAALPNVPTFKEIGL EPVNRMAYYGILGPKGLPRDVVDKVNAGVRKALEDPAVRKRIEDTGSLIVGNTPDQFAEQIKAEFDVYKAVVQKQKLSLE >Mature_320_residues MHRRNWFGFVLLAAAGGAWAQAYPSKPIRLVVPFAPGGTTDIIARVIADPLSRALGQPVVVENKAGGGGIVGASETAKAV PDGYSLGIATVSTTAANPAINPRTPYNPLTDFTPIINIAATPNIIAVNPNFPAKDYKGFVAEVKKVPGKYSYSSSGTGGI GHLQMELYKSLTQIFVTHIPYRGAGPALNDTVAGQVPIIFDNLPSTLPFIKENRLVPIVVAAPQRVAALPNVPTFKEIGL EPVNRMAYYGILGPKGLPRDVVDKVNAGVRKALEDPAVRKRIEDTGSLIVGNTPDQFAEQIKAEFDVYKAVVQKQKLSLE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34059; Mature: 34059
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRNWFGFVLLAAAGGAWAQAYPSKPIRLVVPFAPGGTTDIIARVIADPLSRALGQPVV CCCCCHHHEEEEEECCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEE VENKAGGGGIVGASETAKAVPDGYSLGIATVSTTAANPAINPRTPYNPLTDFTPIINIAA EECCCCCCCEECCCCHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEEEC TPNIIAVNPNFPAKDYKGFVAEVKKVPGKYSYSSSGTGGIGHLQMELYKSLTQIFVTHIP CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC YRGAGPALNDTVAGQVPIIFDNLPSTLPFIKENRLVPIVVAAPQRVAALPNVPTFKEIGL CCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEEEEEECCHHHHCCCCCCCHHHHCC EPVNRMAYYGILGPKGLPRDVVDKVNAGVRKALEDPAVRKRIEDTGSLIVGNTPDQFAEQ CHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCHHHHHHH IKAEFDVYKAVVQKQKLSLE HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHRRNWFGFVLLAAAGGAWAQAYPSKPIRLVVPFAPGGTTDIIARVIADPLSRALGQPVV CCCCCHHHEEEEEECCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEE VENKAGGGGIVGASETAKAVPDGYSLGIATVSTTAANPAINPRTPYNPLTDFTPIINIAA EECCCCCCCEECCCCHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEEEC TPNIIAVNPNFPAKDYKGFVAEVKKVPGKYSYSSSGTGGIGHLQMELYKSLTQIFVTHIP CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC YRGAGPALNDTVAGQVPIIFDNLPSTLPFIKENRLVPIVVAAPQRVAALPNVPTFKEIGL CCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEEEEEECCHHHHCCCCCCCHHHHCC EPVNRMAYYGILGPKGLPRDVVDKVNAGVRKALEDPAVRKRIEDTGSLIVGNTPDQFAEQ CHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCHHHHHHH IKAEFDVYKAVVQKQKLSLE HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]