Click here to switch to the map view.

The map label for this gene is yfcA [C]

Identifier: 120609998

GI number: 120609998

Start: 1438224

End: 1438982

Strand: Direct

Name: yfcA [C]

Synonym: Aave_1311

Alternate gene names: 120609998

Gene position: 1438224-1438982 (Clockwise)

Preceding gene: 120609997

Following gene: 120609999

Centisome position: 26.87

GC content: 66.4

Gene sequence:

>759_bases
ATGCTCTTGAGCGCTGCCATCGCGGGCGTGGGAGGCATTGTCGGCATCGTCGCCGTCACCGTGGGCGGAGGCGTCACCCT
CGGCGTGCCGCTGCTGCTGCTGCTGGGGCATCCCGCCGCCACCGCGATCGCCACCGTCAAGTTCGCGCTGATCGGTTCCT
TCGCCACGGGGGCGCTGGTGCACCGCCGGGACCAGCGCTCCGAAGTCGCCGTGCCCTGGCTGCTCTGGCCGCTGTGCATA
GTGGGCTCCGTGGCGGGTTCGCTGCTGGCCACGGGCATGGACGAGCGCCTGCTCAAGATCCTGGTGGTCGTGCTCATGGC
CGTGGTCCTGTGGATCACCTACCGCACGGACCTGTCTTCCCGGGAGGCGGCTGCGGCGCAGGGCGGTCCGCGCATGTCGG
CCGGGGGCGTGGCCACCGTGTTCGCGCTGTGCGTCTATTCCGGATTCTTCGGCGCTGGCTTCGGCACTTTCCTCATCTTC
GCGCTCATGCATTTCTTCGGGCTCAACTTCGTGCAGAGCGCTTCGGTCATGACGCGCATCAACCTGCTGGTCGTCGGGGC
CTCGGTGAGCACCTTCGCCAGCAAGGGCGTGATCGACTTTCAGCTGGGCATTCCCCTGCTGCTGGGGTGCGCCGTCGGAG
GAATGATGGGTGCCTGGACCGCCAAGACGCTATCGCCGCCCCGCATGAAGGTGGTGTTTCTGGTGTTTTCCATGCTTCTG
GGTTCCAAACTTCTCTGGGATGCCATGGTGCCTGTCTGA

Upstream 100 bases:

>100_bases
ACCTGGGGCGGTTCCGCCTGACCACGGCTGCCCTGATGGGCGACAGCCTGCACCTGGACATCGCGCCTCCGTCTTCCGCC
ATCAGGTCCGTCGCATGGTG

Downstream 100 bases:

>100_bases
AACCGGGCAGTGCCCGAGACTGTCGCGCTCGGCTCCCCGGAGGAGCGCGCCATCCACCACCGATGCGGCAAAGATCACGA
TGGTGAGGGTAATTCCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLLSAAIAGVGGIVGIVAVTVGGGVTLGVPLLLLLGHPAATAIATVKFALIGSFATGALVHRRDQRSEVAVPWLLWPLCI
VGSVAGSLLATGMDERLLKILVVVLMAVVLWITYRTDLSSREAAAAQGGPRMSAGGVATVFALCVYSGFFGAGFGTFLIF
ALMHFFGLNFVQSASVMTRINLLVVGASVSTFASKGVIDFQLGIPLLLGCAVGGMMGAWTAKTLSPPRMKVVFLVFSMLL
GSKLLWDAMVPV

Sequences:

>Translated_252_residues
MLLSAAIAGVGGIVGIVAVTVGGGVTLGVPLLLLLGHPAATAIATVKFALIGSFATGALVHRRDQRSEVAVPWLLWPLCI
VGSVAGSLLATGMDERLLKILVVVLMAVVLWITYRTDLSSREAAAAQGGPRMSAGGVATVFALCVYSGFFGAGFGTFLIF
ALMHFFGLNFVQSASVMTRINLLVVGASVSTFASKGVIDFQLGIPLLLGCAVGGMMGAWTAKTLSPPRMKVVFLVFSMLL
GSKLLWDAMVPV
>Mature_252_residues
MLLSAAIAGVGGIVGIVAVTVGGGVTLGVPLLLLLGHPAATAIATVKFALIGSFATGALVHRRDQRSEVAVPWLLWPLCI
VGSVAGSLLATGMDERLLKILVVVLMAVVLWITYRTDLSSREAAAAQGGPRMSAGGVATVFALCVYSGFFGAGFGTFLIF
ALMHFFGLNFVQSASVMTRINLLVVGASVSTFASKGVIDFQLGIPLLLGCAVGGMMGAWTAKTLSPPRMKVVFLVFSMLL
GSKLLWDAMVPV

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26084; Mature: 26084

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHCCCC
>Mature Secondary Structure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CCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]