Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609991
Identifier: 120609991
GI number: 120609991
Start: 1431459
End: 1431791
Strand: Reverse
Name: 120609991
Synonym: Aave_1304
Alternate gene names: NA
Gene position: 1431791-1431459 (Counterclockwise)
Preceding gene: 120609992
Following gene: 120609989
Centisome position: 26.75
GC content: 67.27
Gene sequence:
>333_bases ATGGCTTTGCAGCATGCACGTTCCGCCGAAGTCGTCAGCGTCCGCCCGCTCGGCGCGGCGCTGGCGGAAACCGCCACCTC CGCCATCATCAAGGCCGCGCAGCTCGAAGTGATACGAGCTGTTCTGCCCGCCGGCAAGGAACTGCGCCAGCACGAGACCC CCGGCGAGCTCACGATCCAGTGCATCGAAGGAGAAGTGGAGCTGCACACCGCTTCGGGCGCGAGCCTGCTGCGCCCTGGC GACCTCGTCCACCTGCAGGCCCGTGCGGTCCATTCGCTGCGCGGGTTGACCGATGCCTCACTGCTGCTGACGCTGTGCCT CGTTCCCGAGTAA
Upstream 100 bases:
>100_bases CCGCCGGGGTGTATTCAGGCATTGCCTTGCGGCGCCGGCTGGGCCACAGTTCCATCCACCCACGACGAAACGCCCCGCAC CGGGGCCAGAGGAGTTTTCC
Downstream 100 bases:
>100_bases GGCTGCGAGCGGGACAGTAACGTCCTACAACCAGCGGTTGGAGCTGCTTACACACGCCTGGAGCGAGCGGAGCGATAGTG TGCACATGGGTAGAAGGACA
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Barrel; Cupin 2 Protein; Cupin 2 Domain-Containing Protein; Cupin Region
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MALQHARSAEVVSVRPLGAALAETATSAIIKAAQLEVIRAVLPAGKELRQHETPGELTIQCIEGEVELHTASGASLLRPG DLVHLQARAVHSLRGLTDASLLLTLCLVPE
Sequences:
>Translated_110_residues MALQHARSAEVVSVRPLGAALAETATSAIIKAAQLEVIRAVLPAGKELRQHETPGELTIQCIEGEVELHTASGASLLRPG DLVHLQARAVHSLRGLTDASLLLTLCLVPE >Mature_109_residues ALQHARSAEVVSVRPLGAALAETATSAIIKAAQLEVIRAVLPAGKELRQHETPGELTIQCIEGEVELHTASGASLLRPGD LVHLQARAVHSLRGLTDASLLLTLCLVPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11572; Mature: 11440
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQHARSAEVVSVRPLGAALAETATSAIIKAAQLEVIRAVLPAGKELRQHETPGELTIQ CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEE CIEGEVELHTASGASLLRPGDLVHLQARAVHSLRGLTDASLLLTLCLVPE EECCEEEEEECCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure ALQHARSAEVVSVRPLGAALAETATSAIIKAAQLEVIRAVLPAGKELRQHETPGELTIQ CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEE CIEGEVELHTASGASLLRPGDLVHLQARAVHSLRGLTDASLLLTLCLVPE EECCEEEEEECCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA