Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is catD [H]
Identifier: 120609989
GI number: 120609989
Start: 1429874
End: 1430731
Strand: Reverse
Name: catD [H]
Synonym: Aave_1302
Alternate gene names: 120609989
Gene position: 1430731-1429874 (Counterclockwise)
Preceding gene: 120609991
Following gene: 120609987
Centisome position: 26.73
GC content: 71.68
Gene sequence:
>858_bases ATGGCCGGGGACGACTTCAGCGCATTCGCCGAAGAGCAGGTCCTGCAGTTGCCCACCGCGCACGGCGGCCACCTTCGCTA CCAGGACCGCGGCAGGGGCCCCGCCGTCCTGCTCGGCCACAGCTATCTGTGGAACTCCACGATGTGGGAGCCCCAGATCC GCGCACTTTCGCGCTGCTACCGCGTGATCGCGCCGGATCTCTGGGGCCATGGAGCGTCCGGCCCCTTGCCGCGCGGCACG CACGATCTGCAGGCACTGGCCGGTCACATGCTGTCCATGCTCGATGCCTTGCAGATCGACGAGTTCGCGGTGGTCGGCCT GTCGGCCGGCGGCCTGTGGGGCGCGGAACTGGCACTGCTGGCTCCCGAGCGGGTGCGCAGCCTGGTGCTCATGGGCACCC GCCTGGGCGCGGAACCCGCAGCGACGCACCGCCACTACGCAGGCCTGCTCGACGCGATCGAGGCCGCAGGACGTGTCACC CCGGCCCTGGCGCAGGCCATCGTTCCGCTCTTCTTCCGCGCCGGCACGGACATGGATGCCGAGCATCCGGCGGCGTTCGC GCGCTGCCTGGCGTCGATGCCCACCGACCGGCTGCGCGATTCGATCGTCCCCCTGGGCCGGCTCCTGCTGGCGCGGCGCG ACGCGCCGGGTCAACTGGCGGCGCTGGACCCGGGCACCACGCTGATGATGTGCGGCGACGGCGATACCGCCTGCCCGCCC CGCGGGATACAGGATCTGGCGCACTCGCTGGGCTGCGATGCCGTGCTCGTGCCGGCCGCGGGCCACATTGCGAACCTGGA CAACCCCGAAGCCGTCAACCACCACCTGCTGCGGTGGCTGGAGCGCACGCTGCGCTGA
Upstream 100 bases:
>100_bases GCCGCGCACCGGAACGCCCCCCTGCGCCGAAGGGGGGCAGCCATGGCGGCCGGCACTGCGGTTCCGGGGAGCCGGCCCGG CGGCAGCAGGCGCCTTTCCG
Downstream 100 bases:
>100_bases CGGCGCGGGTAGCGCCGATGCGCGGCCGCGCTTTCCCTGTCATGCGGCCTGCCGGCGGCCCGCACGCCAGGCGCCGAAGA TCGCGATCAGGCCCGGCACC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MAGDDFSAFAEEQVLQLPTAHGGHLRYQDRGRGPAVLLGHSYLWNSTMWEPQIRALSRCYRVIAPDLWGHGASGPLPRGT HDLQALAGHMLSMLDALQIDEFAVVGLSAGGLWGAELALLAPERVRSLVLMGTRLGAEPAATHRHYAGLLDAIEAAGRVT PALAQAIVPLFFRAGTDMDAEHPAAFARCLASMPTDRLRDSIVPLGRLLLARRDAPGQLAALDPGTTLMMCGDGDTACPP RGIQDLAHSLGCDAVLVPAAGHIANLDNPEAVNHHLLRWLERTLR
Sequences:
>Translated_285_residues MAGDDFSAFAEEQVLQLPTAHGGHLRYQDRGRGPAVLLGHSYLWNSTMWEPQIRALSRCYRVIAPDLWGHGASGPLPRGT HDLQALAGHMLSMLDALQIDEFAVVGLSAGGLWGAELALLAPERVRSLVLMGTRLGAEPAATHRHYAGLLDAIEAAGRVT PALAQAIVPLFFRAGTDMDAEHPAAFARCLASMPTDRLRDSIVPLGRLLLARRDAPGQLAALDPGTTLMMCGDGDTACPP RGIQDLAHSLGCDAVLVPAAGHIANLDNPEAVNHHLLRWLERTLR >Mature_284_residues AGDDFSAFAEEQVLQLPTAHGGHLRYQDRGRGPAVLLGHSYLWNSTMWEPQIRALSRCYRVIAPDLWGHGASGPLPRGTH DLQALAGHMLSMLDALQIDEFAVVGLSAGGLWGAELALLAPERVRSLVLMGTRLGAEPAATHRHYAGLLDAIEAAGRVTP ALAQAIVPLFFRAGTDMDAEHPAAFARCLASMPTDRLRDSIVPLGRLLLARRDAPGQLAALDPGTTLMMCGDGDTACPPR GIQDLAHSLGCDAVLVPAAGHIANLDNPEAVNHHLLRWLERTLR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 30503; Mature: 30372
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDDFSAFAEEQVLQLPTAHGGHLRYQDRGRGPAVLLGHSYLWNSTMWEPQIRALSRCY CCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHH RVIAPDLWGHGASGPLPRGTHDLQALAGHMLSMLDALQIDEFAVVGLSAGGLWGAELALL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHC APERVRSLVLMGTRLGAEPAATHRHYAGLLDAIEAAGRVTPALAQAIVPLFFRAGTDMDA CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC EHPAAFARCLASMPTDRLRDSIVPLGRLLLARRDAPGQLAALDPGTTLMMCGDGDTACPP CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCC RGIQDLAHSLGCDAVLVPAAGHIANLDNPEAVNHHLLRWLERTLR CCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGDDFSAFAEEQVLQLPTAHGGHLRYQDRGRGPAVLLGHSYLWNSTMWEPQIRALSRCY CCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHH RVIAPDLWGHGASGPLPRGTHDLQALAGHMLSMLDALQIDEFAVVGLSAGGLWGAELALL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHC APERVRSLVLMGTRLGAEPAATHRHYAGLLDAIEAAGRVTPALAQAIVPLFFRAGTDMDA CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC EHPAAFARCLASMPTDRLRDSIVPLGRLLLARRDAPGQLAALDPGTTLMMCGDGDTACPP CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCC RGIQDLAHSLGCDAVLVPAAGHIANLDNPEAVNHHLLRWLERTLR CCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]