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The map label for this gene is ygaF [H]

Identifier: 120609922

GI number: 120609922

Start: 1359947

End: 1360432

Strand: Reverse

Name: ygaF [H]

Synonym: Aave_1235

Alternate gene names: 120609922

Gene position: 1360432-1359947 (Counterclockwise)

Preceding gene: 120609923

Following gene: 120609921

Centisome position: 25.42

GC content: 60.08

Gene sequence:

>486_bases
ATGGCGATCGTTGTCAACAAACCCCTCCCCGAATTCGAAGCCAACGCGACCGGTGGCATCAAGGTCTCCAACACATCGCA
CCTCGGCCAGATCCTGATCCTGTACTTCTACCCCAAGGACAACACCCCCGGCTGCACCACCGAGGCCATGCAGTTCCGCG
ACAAGTACGAGGATTTCGCCCAGGCCGGCGCCGCCGTGTTCGGCGTGTCGCGGGACAACATGAAGTCCCACGACGACTTC
AAGGAAAAGCTGGAACTGCCCTTCGAGCTCATCGCCGACACCGAAGAGAAGATGTGCCACATGTTCGGCGTGGTCAAGAA
CAAGATCATGTACGGCAAGAAGGTCAAGGGCATCGAGCGCAGCACCTTCCTCATCGGCCCCGATGGCGTGCTGGTCCAGG
AATGGCGCGGCCTCAAGGTGCCCGGACACGTGGACGAGGTTCTCAAGGCCGTGAAGTCCATCAAGGCCCTCAAGAAGGCG
GCGTAA

Upstream 100 bases:

>100_bases
GTTTCAAGGTAAAATTACGGGTTGCGGTCGGAGGCCTTCCAAGAGCAATAACACACAACTCCTCCGGCTTTTCAACGACT
ACATCAAAGATTGAAGTGCC

Downstream 100 bases:

>100_bases
GCGCCTACAGCCGCGCCGCGCGCGGCATGCCGGGAGTGCCACGGCAACCGTGCATAATGGTTTCAATGCTGCTGCACGAC
GCAACGCTCCCCCACCCCCA

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAIVVNKPLPEFEANATGGIKVSNTSHLGQILILYFYPKDNTPGCTTEAMQFRDKYEDFAQAGAAVFGVSRDNMKSHDDF
KEKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIERSTFLIGPDGVLVQEWRGLKVPGHVDEVLKAVKSIKALKKA
A

Sequences:

>Translated_161_residues
MAIVVNKPLPEFEANATGGIKVSNTSHLGQILILYFYPKDNTPGCTTEAMQFRDKYEDFAQAGAAVFGVSRDNMKSHDDF
KEKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIERSTFLIGPDGVLVQEWRGLKVPGHVDEVLKAVKSIKALKKA
A
>Mature_160_residues
AIVVNKPLPEFEANATGGIKVSNTSHLGQILILYFYPKDNTPGCTTEAMQFRDKYEDFAQAGAAVFGVSRDNMKSHDDFK
EKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIERSTFLIGPDGVLVQEWRGLKVPGHVDEVLKAVKSIKALKKAA

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=165, Percent_Identity=33.9393939393939, Blast_Score=67, Evalue=7e-12,
Organism=Escherichia coli, GI1788825, Length=143, Percent_Identity=37.7622377622378, Blast_Score=99, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI32565831, Length=167, Percent_Identity=29.3413173652695, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193204376, Length=167, Percent_Identity=29.3413173652695, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322180, Length=107, Percent_Identity=28.9719626168224, Blast_Score=68, Evalue=7e-13,
Organism=Drosophila melanogaster, GI17738015, Length=172, Percent_Identity=29.6511627906977, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17906; Mature: 17775

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVVNKPLPEFEANATGGIKVSNTSHLGQILILYFYPKDNTPGCTTEAMQFRDKYEDFA
CEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
QAGAAVFGVSRDNMKSHDDFKEKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIER
HCCCEEEECCCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
STFLIGPDGVLVQEWRGLKVPGHVDEVLKAVKSIKALKKAA
CEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIVVNKPLPEFEANATGGIKVSNTSHLGQILILYFYPKDNTPGCTTEAMQFRDKYEDFA
EEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
QAGAAVFGVSRDNMKSHDDFKEKLELPFELIADTEEKMCHMFGVVKNKIMYGKKVKGIER
HCCCEEEECCCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
STFLIGPDGVLVQEWRGLKVPGHVDEVLKAVKSIKALKKAA
CEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]