Click here to switch to the map view.

The map label for this gene is 120609923

Identifier: 120609923

GI number: 120609923

Start: 1360580

End: 1360957

Strand: Reverse

Name: 120609923

Synonym: Aave_1236

Alternate gene names: NA

Gene position: 1360957-1360580 (Counterclockwise)

Preceding gene: 120609930

Following gene: 120609922

Centisome position: 25.43

GC content: 67.99

Gene sequence:

>378_bases
ATGAAATTCCAGCCCGACCGCTCCGAAGCCCAGACCATCAGCGCCTACGGCGCGGACTGGATCGCGGTCGATGGGGAAAA
GCTCACGGGCAGCGTGGTGATCGGCTCCCGGGGCGAGCGGAGGGAATGGCAGTGCAACCGCTTCGAGGACCTCACCGCCG
AGCATTTCGCGCTGCTGGCGGAACTCGACGCGGAAGTGGTCATCTTCGGCAGCGGTCAGCGCAACCGTTTCCCGCCACCG
GCGTGGCTGCGGCCCCTCATGGCACGGCGCATCGGCCTGGAAACCATGGACACCCAGGCCGCGTGCCGGACGTACAACAT
CCTGGCGGGGGAAGGCCGCCACGTGGTCGCCGCGCTGCTGCTGGAACCCAAGGCGTGA

Upstream 100 bases:

>100_bases
GCGAAACCTATAATTTGACCACAGTTCCACGGTGGATTCCCGCCCCGCTCCGCCGGGCGCCGTGCCGGCCCGCAACGCAC
TCCCGAAGGCGCCTCTCCCC

Downstream 100 bases:

>100_bases
AACGGGCGTGGATCTTGGTTACAGACCTGCGATTCGCGAAAGAGTCCGTTTCAAGGTAAAATTACGGGTTGCGGTCGGAG
GCCTTCCAAGAGCAATAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKFQPDRSEAQTISAYGADWIAVDGEKLTGSVVIGSRGERREWQCNRFEDLTAEHFALLAELDAEVVIFGSGQRNRFPPP
AWLRPLMARRIGLETMDTQAACRTYNILAGEGRHVVAALLLEPKA

Sequences:

>Translated_125_residues
MKFQPDRSEAQTISAYGADWIAVDGEKLTGSVVIGSRGERREWQCNRFEDLTAEHFALLAELDAEVVIFGSGQRNRFPPP
AWLRPLMARRIGLETMDTQAACRTYNILAGEGRHVVAALLLEPKA
>Mature_125_residues
MKFQPDRSEAQTISAYGADWIAVDGEKLTGSVVIGSRGERREWQCNRFEDLTAEHFALLAELDAEVVIFGSGQRNRFPPP
AWLRPLMARRIGLETMDTQAACRTYNILAGEGRHVVAALLLEPKA

Specific function: Unknown

COG id: COG3737

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13929; Mature: 13929

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQPDRSEAQTISAYGADWIAVDGEKLTGSVVIGSRGERREWQCNRFEDLTAEHFALLA
CCCCCCCCCHHHHHHCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
ELDAEVVIFGSGQRNRFPPPAWLRPLMARRIGLETMDTQAACRTYNILAGEGRHVVAALL
HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCEEEEEEE
LEPKA
ECCCC
>Mature Secondary Structure
MKFQPDRSEAQTISAYGADWIAVDGEKLTGSVVIGSRGERREWQCNRFEDLTAEHFALLA
CCCCCCCCCHHHHHHCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
ELDAEVVIFGSGQRNRFPPPAWLRPLMARRIGLETMDTQAACRTYNILAGEGRHVVAALL
HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCEEEEEEE
LEPKA
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA