Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ylaK [H]
Identifier: 120609921
GI number: 120609921
Start: 1357942
End: 1359426
Strand: Reverse
Name: ylaK [H]
Synonym: Aave_1234
Alternate gene names: 120609921
Gene position: 1359426-1357942 (Counterclockwise)
Preceding gene: 120609922
Following gene: 120609920
Centisome position: 25.4
GC content: 67.61
Gene sequence:
>1485_bases GTGGCGCCTGAAGCCCAGCGCGGGTTGCCTGCCGTCCGCGCGGCCGCACCCGCGCCCGAGGCGGCCGCCCGTCCCCGCAA GGGCCGCGGCACCGGCCCCACGAAGATGTTCGTGCTGGACACCAACGTCCTGCTGCACGACCCGACCAGCCTCTTCCGCT TCGAAGAGCACGACATCTTCCTGCCCATGATCGTGCTGGAGGAGCTCGACGGCCACAAGAAGGGCATGACCGAAGTGGCG CGCAACGGCCGGCAGGCGAGCCGCACGCTCGACCAGCTCGCCGCCACCCAGGGCGCAGATATCGCCCGCGGCCTCAAGCT GGATGCCACGGGCCAGCGCGCGGCCGGCGGCTGCCTGTACTTCCAGACCGAACCGCTGGATTACCATCTGCCCACCAGCC TGCCACCCGGCAAGGCCGACAACCAGATCCTGGGCGTCGTGGAAGCGCTGCGGCACAAGTACGCGCCGCGCGAGGTCGTG CTGGTGTCCAAGGACATCAACATGCGCGTCAAGGCGCGCGCGCTCGGCCTCACCGCCGAGGACTACCAGAACGACAAGGC ACTGGAAGACGGCGACCTGCTGTACTCCGGCGTGCTGGCCCTGCCGGCCGACTTCTGGACGAAGACCGGCAAGAACGTCG AGAGCTGGCAAAGCGGCGCGCACACGTACTACCGCATCGGCGGGCCGATCGTGCCGCAGCTCATGATCAACCAGTTCGTC TATTTCGAGGCCCCCGGCGAGCCCAGCCTGTTCGCGCGGGTGACGGAGATCCGCGACAAGACCGCCGTGCTGCAGACCCT CAAGGACTACGGTTCTGCCAAGAACACCGTCTGGGGCGTGAACACGCGCAATCGCGAGCAGAACTTCGCGATGAACCTGC TCATGGACCCGGAGGTCGATTTCGTCACGCTCACCGGCACGGCCGGCACCGGCAAGACCCTCATGGCGCTCGCCGCCGGC CTGACGCAGGTGCTCGACGAGCGCCGCTACACCGAGATCATCATGACCCGCGCCACCGTGAGCGTGGGCGAGGACATCGG CTTCCTGCCCGGCACCGAGGAGGAGAAGATGGGCCCCTGGATGGGCGCTCTGGACGACAACCTCGAATTCCTCGCCAAGG GCGACGGCGGCAATGCCGGCGAATGGGGCCGCGCCGCCACCAACGAGCTCATCCGCAGCCGCATCAAGATCAAGAGCATG AACTTCATGCGCGGCCGCACCTTCCTCAACAAGTACGTCATCATCGACGAGGCCCAGAACCTGACGCCCAAGCAGATGAA GACGCTGATCACGCGCGCGGGCCCGGGCACCAAGATCATCTGCATGGGCAACCTCGCGCAGATCGACACGCCCTACCTGA CCGAAGGCTCCTCCGGCCTCACCTACGCGGTGGACCGCTTCAAGGGCTGGCCGCACAGCGGGCACATCACCCTGGCGCGC GGCGAGCGCTCGCGCCTCGCGGATTTCGCGAGCGAGGTGCTCTGA
Upstream 100 bases:
>100_bases GCCGGCGCCGGTGGCTGCGCCCTCCGCCACGGCGCCCGGCACATCCCGGCGCACCGCCAGGCGCACCGCCCCGGCCACGG CGCCAGCCCCCATCCAGGCC
Downstream 100 bases:
>100_bases CGCATGGCCATCAGCTGGATCACGGCACTGCAGCTCGTCCCGTGGGACAAGGTGATCGAAGCCTCTCCGCAGCTCATCAA GGCCGCGAAGGGGTTGCTGC
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MAPEAQRGLPAVRAAAPAPEAAARPRKGRGTGPTKMFVLDTNVLLHDPTSLFRFEEHDIFLPMIVLEELDGHKKGMTEVA RNGRQASRTLDQLAATQGADIARGLKLDATGQRAAGGCLYFQTEPLDYHLPTSLPPGKADNQILGVVEALRHKYAPREVV LVSKDINMRVKARALGLTAEDYQNDKALEDGDLLYSGVLALPADFWTKTGKNVESWQSGAHTYYRIGGPIVPQLMINQFV YFEAPGEPSLFARVTEIRDKTAVLQTLKDYGSAKNTVWGVNTRNREQNFAMNLLMDPEVDFVTLTGTAGTGKTLMALAAG LTQVLDERRYTEIIMTRATVSVGEDIGFLPGTEEEKMGPWMGALDDNLEFLAKGDGGNAGEWGRAATNELIRSRIKIKSM NFMRGRTFLNKYVIIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGLTYAVDRFKGWPHSGHITLAR GERSRLADFASEVL
Sequences:
>Translated_494_residues MAPEAQRGLPAVRAAAPAPEAAARPRKGRGTGPTKMFVLDTNVLLHDPTSLFRFEEHDIFLPMIVLEELDGHKKGMTEVA RNGRQASRTLDQLAATQGADIARGLKLDATGQRAAGGCLYFQTEPLDYHLPTSLPPGKADNQILGVVEALRHKYAPREVV LVSKDINMRVKARALGLTAEDYQNDKALEDGDLLYSGVLALPADFWTKTGKNVESWQSGAHTYYRIGGPIVPQLMINQFV YFEAPGEPSLFARVTEIRDKTAVLQTLKDYGSAKNTVWGVNTRNREQNFAMNLLMDPEVDFVTLTGTAGTGKTLMALAAG LTQVLDERRYTEIIMTRATVSVGEDIGFLPGTEEEKMGPWMGALDDNLEFLAKGDGGNAGEWGRAATNELIRSRIKIKSM NFMRGRTFLNKYVIIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGLTYAVDRFKGWPHSGHITLAR GERSRLADFASEVL >Mature_493_residues APEAQRGLPAVRAAAPAPEAAARPRKGRGTGPTKMFVLDTNVLLHDPTSLFRFEEHDIFLPMIVLEELDGHKKGMTEVAR NGRQASRTLDQLAATQGADIARGLKLDATGQRAAGGCLYFQTEPLDYHLPTSLPPGKADNQILGVVEALRHKYAPREVVL VSKDINMRVKARALGLTAEDYQNDKALEDGDLLYSGVLALPADFWTKTGKNVESWQSGAHTYYRIGGPIVPQLMINQFVY FEAPGEPSLFARVTEIRDKTAVLQTLKDYGSAKNTVWGVNTRNREQNFAMNLLMDPEVDFVTLTGTAGTGKTLMALAAGL TQVLDERRYTEIIMTRATVSVGEDIGFLPGTEEEKMGPWMGALDDNLEFLAKGDGGNAGEWGRAATNELIRSRIKIKSMN FMRGRTFLNKYVIIDEAQNLTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGLTYAVDRFKGWPHSGHITLARG ERSRLADFASEVL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=189, Percent_Identity=34.3915343915344, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI145693103, Length=208, Percent_Identity=35.5769230769231, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 54187; Mature: 54055
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPEAQRGLPAVRAAAPAPEAAARPRKGRGTGPTKMFVLDTNVLLHDPTSLFRFEEHDIF CCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCEEEEEEECCEEEECCHHHHEECCCCEE LPMIVLEELDGHKKGMTEVARNGRQASRTLDQLAATQGADIARGLKLDATGQRAAGGCLY EHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCEECCCCCCCCCCEEE FQTEPLDYHLPTSLPPGKADNQILGVVEALRHKYAPREVVLVSKDINMRVKARALGLTAE EECCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHH DYQNDKALEDGDLLYSGVLALPADFWTKTGKNVESWQSGAHTYYRIGGPIVPQLMINQFV HCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCHHHHHCCCCEEEEECCCHHHHHHHCCEE YFEAPGEPSLFARVTEIRDKTAVLQTLKDYGSAKNTVWGVNTRNREQNFAMNLLMDPEVD EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCC FVTLTGTAGTGKTLMALAAGLTQVLDERRYTEIIMTRATVSVGEDIGFLPGTEEEKMGPW EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC MGALDDNLEFLAKGDGGNAGEWGRAATNELIRSRIKIKSMNFMRGRTFLNKYVIIDEAQN CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHEEEEEECCCC LTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGLTYAVDRFKGWPHSGHITLAR CCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCEECCCCCCEEEHHHHCCCCCCCCEEEEC GERSRLADFASEVL CCHHHHHHHHHHCC >Mature Secondary Structure APEAQRGLPAVRAAAPAPEAAARPRKGRGTGPTKMFVLDTNVLLHDPTSLFRFEEHDIF CCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCEEEEEEECCEEEECCHHHHEECCCCEE LPMIVLEELDGHKKGMTEVARNGRQASRTLDQLAATQGADIARGLKLDATGQRAAGGCLY EHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCEECCCCCCCCCCEEE FQTEPLDYHLPTSLPPGKADNQILGVVEALRHKYAPREVVLVSKDINMRVKARALGLTAE EECCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHH DYQNDKALEDGDLLYSGVLALPADFWTKTGKNVESWQSGAHTYYRIGGPIVPQLMINQFV HCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCHHHHHCCCCEEEEECCCHHHHHHHCCEE YFEAPGEPSLFARVTEIRDKTAVLQTLKDYGSAKNTVWGVNTRNREQNFAMNLLMDPEVD EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCC FVTLTGTAGTGKTLMALAAGLTQVLDERRYTEIIMTRATVSVGEDIGFLPGTEEEKMGPW EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC MGALDDNLEFLAKGDGGNAGEWGRAATNELIRSRIKIKSMNFMRGRTFLNKYVIIDEAQN CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHEEEEEECCCC LTPKQMKTLITRAGPGTKIICMGNLAQIDTPYLTEGSSGLTYAVDRFKGWPHSGHITLAR CCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCEECCCCCCEEEHHHHCCCCCCCCEEEEC GERSRLADFASEVL CCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]