Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609920
Identifier: 120609920
GI number: 120609920
Start: 1357531
End: 1357938
Strand: Reverse
Name: 120609920
Synonym: Aave_1233
Alternate gene names: NA
Gene position: 1357938-1357531 (Counterclockwise)
Preceding gene: 120609921
Following gene: 120609914
Centisome position: 25.37
GC content: 71.32
Gene sequence:
>408_bases ATGGCCATCAGCTGGATCACGGCACTGCAGCTCGTCCCGTGGGACAAGGTGATCGAAGCCTCTCCGCAGCTCATCAAGGC CGCGAAGGGGTTGCTGCGCAGCCGTGGAGCCCAGGAAGCCGAACAGGCGCAGGCGGACGAGGAGGCCGCACGCCTGGCGG CATCCACCGCCCCGTCGCCACAGGAACTGGCCCTGCAGCGCATCGGCGCCCTGGAGGACCAGGTGCAGGCGCTGGAGCAA TCGCAGCGCCAGGCCCTGGAGGTCATCGAGCAGCTGGCCCAGCAGAACGCCCAGCTCGTCGCCACCGTGAGCGCCCTGCG CACGGGCGCGCAGCGCCTGGCGGTGGCCTGCGGGGTGCTGGGCGTGGTGCTGCTGGGGATGGTGGCCTACACCGTCGCCA GGGCGTAG
Upstream 100 bases:
>100_bases GGTGGACCGCTTCAAGGGCTGGCCGCACAGCGGGCACATCACCCTGGCGCGCGGCGAGCGCTCGCGCCTCGCGGATTTCG CGAGCGAGGTGCTCTGACGC
Downstream 100 bases:
>100_bases GGCGGCGCAGGCCCGTCCTGGCCGGCGTCAGAAATCGTCGCCCGACCCCATGGCGAGGTTCTCGAACCGCGTCTGGTTCT TCTGGAAGAACAGCTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAISWITALQLVPWDKVIEASPQLIKAAKGLLRSRGAQEAEQAQADEEAARLAASTAPSPQELALQRIGALEDQVQALEQ SQRQALEVIEQLAQQNAQLVATVSALRTGAQRLAVACGVLGVVLLGMVAYTVARA
Sequences:
>Translated_135_residues MAISWITALQLVPWDKVIEASPQLIKAAKGLLRSRGAQEAEQAQADEEAARLAASTAPSPQELALQRIGALEDQVQALEQ SQRQALEVIEQLAQQNAQLVATVSALRTGAQRLAVACGVLGVVLLGMVAYTVARA >Mature_134_residues AISWITALQLVPWDKVIEASPQLIKAAKGLLRSRGAQEAEQAQADEEAARLAASTAPSPQELALQRIGALEDQVQALEQS QRQALEVIEQLAQQNAQLVATVSALRTGAQRLAVACGVLGVVLLGMVAYTVARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14281; Mature: 14149
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISWITALQLVPWDKVIEASPQLIKAAKGLLRSRGAQEAEQAQADEEAARLAASTAPSP CCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH QELALQRIGALEDQVQALEQSQRQALEVIEQLAQQNAQLVATVSALRTGAQRLAVACGVL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GVVLLGMVAYTVARA HHHHHHHHHHHHHCC >Mature Secondary Structure AISWITALQLVPWDKVIEASPQLIKAAKGLLRSRGAQEAEQAQADEEAARLAASTAPSP CHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH QELALQRIGALEDQVQALEQSQRQALEVIEQLAQQNAQLVATVSALRTGAQRLAVACGVL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GVVLLGMVAYTVARA HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA