Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609892
Identifier: 120609892
GI number: 120609892
Start: 1327689
End: 1328900
Strand: Reverse
Name: 120609892
Synonym: Aave_1205
Alternate gene names: NA
Gene position: 1328900-1327689 (Counterclockwise)
Preceding gene: 120609893
Following gene: 120609891
Centisome position: 24.83
GC content: 69.8
Gene sequence:
>1212_bases ATGAAACTGCTCGGCACCACGACGCATATCGCAGCCGCGAGCGCCGTCTCGCTGGCAGCCCAGGGGCTCTTCGGACTGCT CATGCTTCGGCTTTTCCAGCCCCGGGAGGTGGGGCTTTTCACGGTGGTGAGCCAGATCGGCTTCTTCTGGATGACGCTGG CGCTTGCCCAGAGCCAGCTGCGGTTCCTGGCCAACATCCACCACCCTCCGGGCCTGGCCCTCCGGGAAGCCATGCGCGCC AGCCTGTGGCGCTGGGCCCTTCTGCTTCCGATCGCGGCGACGGCCGTCTGGCTGGCGGACCTGGGACGCCCGGGCGCATG CCTGGCCTGGGCGGCCCTCCTGGCACTGCTGCAGCTGGGCTGGTACCTGGCACAGCCATGGACCCTGCGCACGGCATCCG CGCAGTCGGCCGCCCTGGCCCGGTCGGTCCCGCCGCTCGCCGCGCTCGCGGCGGCTGGCAGTGCAGGACTGCTCCTGCCT GGCGCCGGTGCCACGGCGCTCTTCGCGGCGGCGGCTGGCAGTTACGCGATCGGCGCGCTCTGGCTGTTGCGTCCCGCGCG CGATGCACGCACCTTGCCGGCCCCACCAGAAGAAGACCATCGCACGCCAGGAGAAACGCACCCGTCGCAGCAGGACGACC GGGGCCCGCTCCTGCGCATCGCACACACCGCCGCCGACGCCGCGGCAGGGATGGCGGTTCTCGTCTTGTGGCAGCGCTTC CATGGGGCCACGGAAGCAAGCTATCTGGCCGTTCTGCTGCGGCTGCTCGGACTGCTGCCTGCCGTGGTGTACGCCGCGTG GCCCCAGGTGCTGCTCTCACAGGGGCGCGAGCATCCCACGCTGTCACTGCGGATCGGGCTGGCGGGCGCGGCCTGCACCA TGCTGGCGGGCCTGGCCGCCGCCTGGGCGCTCCATGCAGGGTGGATTCCATCCGCATGGCAGGGCCTGGAAGGCTATCTG GTACCGCTGGTGATCTGGCAGGGATGCGCCTGCCTTTTCGCCGCGCACGGCCATTTGCCTTTCCAGCGCGGACTGGCGCG CCCCTTCTCATGGGCCGCCATCGGGTTCGACGGGCTGCAAATGGCCGTCCTGTGTCTTCCGCTCGCCTGGCCCGGCATCG ATCCGGTGGCGCACATATGGACCCTGGCAGGAACATCTGCTGCCGTCCTGCTGGCCATGGTGCGCTGGATGACGGGCAAA AAACTAAAATAG
Upstream 100 bases:
>100_bases GCCTGGACGAGCAGCCCCGCACCGTCCCGCCGATGCAAGCGCATGCCTGGAATGCGCTGCTGGCCCGCATGCACATATGG CGCCGATGGCAGGAGCGCGC
Downstream 100 bases:
>100_bases CGGGTTCAGCCAGTCCACCAGCCGCTACCACGGCGCATACGCTCGTTTCTATGCTCCCCCCCCAGAATCCTTCCGCGCCC ACCGCCGCCCCCTCCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKLLGTTTHIAAASAVSLAAQGLFGLLMLRLFQPREVGLFTVVSQIGFFWMTLALAQSQLRFLANIHHPPGLALREAMRA SLWRWALLLPIAATAVWLADLGRPGACLAWAALLALLQLGWYLAQPWTLRTASAQSAALARSVPPLAALAAAGSAGLLLP GAGATALFAAAAGSYAIGALWLLRPARDARTLPAPPEEDHRTPGETHPSQQDDRGPLLRIAHTAADAAAGMAVLVLWQRF HGATEASYLAVLLRLLGLLPAVVYAAWPQVLLSQGREHPTLSLRIGLAGAACTMLAGLAAAWALHAGWIPSAWQGLEGYL VPLVIWQGCACLFAAHGHLPFQRGLARPFSWAAIGFDGLQMAVLCLPLAWPGIDPVAHIWTLAGTSAAVLLAMVRWMTGK KLK
Sequences:
>Translated_403_residues MKLLGTTTHIAAASAVSLAAQGLFGLLMLRLFQPREVGLFTVVSQIGFFWMTLALAQSQLRFLANIHHPPGLALREAMRA SLWRWALLLPIAATAVWLADLGRPGACLAWAALLALLQLGWYLAQPWTLRTASAQSAALARSVPPLAALAAAGSAGLLLP GAGATALFAAAAGSYAIGALWLLRPARDARTLPAPPEEDHRTPGETHPSQQDDRGPLLRIAHTAADAAAGMAVLVLWQRF HGATEASYLAVLLRLLGLLPAVVYAAWPQVLLSQGREHPTLSLRIGLAGAACTMLAGLAAAWALHAGWIPSAWQGLEGYL VPLVIWQGCACLFAAHGHLPFQRGLARPFSWAAIGFDGLQMAVLCLPLAWPGIDPVAHIWTLAGTSAAVLLAMVRWMTGK KLK >Mature_403_residues MKLLGTTTHIAAASAVSLAAQGLFGLLMLRLFQPREVGLFTVVSQIGFFWMTLALAQSQLRFLANIHHPPGLALREAMRA SLWRWALLLPIAATAVWLADLGRPGACLAWAALLALLQLGWYLAQPWTLRTASAQSAALARSVPPLAALAAAGSAGLLLP GAGATALFAAAAGSYAIGALWLLRPARDARTLPAPPEEDHRTPGETHPSQQDDRGPLLRIAHTAADAAAGMAVLVLWQRF HGATEASYLAVLLRLLGLLPAVVYAAWPQVLLSQGREHPTLSLRIGLAGAACTMLAGLAAAWALHAGWIPSAWQGLEGYL VPLVIWQGCACLFAAHGHLPFQRGLARPFSWAAIGFDGLQMAVLCLPLAWPGIDPVAHIWTLAGTSAAVLLAMVRWMTGK KLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42644; Mature: 42644
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLGTTTHIAAASAVSLAAQGLFGLLMLRLFQPREVGLFTVVSQIGFFWMTLALAQSQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RFLANIHHPPGLALREAMRASLWRWALLLPIAATAVWLADLGRPGACLAWAALLALLQLG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH WYLAQPWTLRTASAQSAALARSVPPLAALAAAGSAGLLLPGAGATALFAAAAGSYAIGAL HHHCCCCEEECCCHHHHHHHHCCCHHHHHHHCCCCCEEECCCCHHHHHHHHCCCHHHHHH WLLRPARDARTLPAPPEEDHRTPGETHPSQQDDRGPLLRIAHTAADAAAGMAVLVLWQRF HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH HGATEASYLAVLLRLLGLLPAVVYAAWPQVLLSQGREHPTLSLRIGLAGAACTMLAGLAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHH AWALHAGWIPSAWQGLEGYLVPLVIWQGCACLFAAHGHLPFQRGLARPFSWAAIGFDGLQ HHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCHHHHH MAVLCLPLAWPGIDPVAHIWTLAGTSAAVLLAMVRWMTGKKLK HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLLGTTTHIAAASAVSLAAQGLFGLLMLRLFQPREVGLFTVVSQIGFFWMTLALAQSQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RFLANIHHPPGLALREAMRASLWRWALLLPIAATAVWLADLGRPGACLAWAALLALLQLG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH WYLAQPWTLRTASAQSAALARSVPPLAALAAAGSAGLLLPGAGATALFAAAAGSYAIGAL HHHCCCCEEECCCHHHHHHHHCCCHHHHHHHCCCCCEEECCCCHHHHHHHHCCCHHHHHH WLLRPARDARTLPAPPEEDHRTPGETHPSQQDDRGPLLRIAHTAADAAAGMAVLVLWQRF HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH HGATEASYLAVLLRLLGLLPAVVYAAWPQVLLSQGREHPTLSLRIGLAGAACTMLAGLAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHH AWALHAGWIPSAWQGLEGYLVPLVIWQGCACLFAAHGHLPFQRGLARPFSWAAIGFDGLQ HHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCHHHHH MAVLCLPLAWPGIDPVAHIWTLAGTSAAVLLAMVRWMTGKKLK HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA