Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609893
Identifier: 120609893
GI number: 120609893
Start: 1328897
End: 1329817
Strand: Reverse
Name: 120609893
Synonym: Aave_1206
Alternate gene names: NA
Gene position: 1329817-1328897 (Counterclockwise)
Preceding gene: 120609894
Following gene: 120609892
Centisome position: 24.84
GC content: 68.95
Gene sequence:
>921_bases ATGCTGATCCATTTCATCCATTCCGGGCAAGCCTACCTGCCGGAACTGGGAGCCTACTCCGCGTTCCTGCAGCAGTCCGG ACACCAGGCCGTGCTCCACAGCCATCCCGGCACGGTACCCGGCGATGCCGAGGTACTGTGGTGGATCTGCGGGCTCGTGC CCCCGGCCAGCGCCCGGCGCCATTCCGGGGCGTTCCAGGTGCACGAATACGCGTCGGCATCGGTGCCGCCCTGCGCCTGG CTCAAGGACAGGATCAAATCCTGGCGCCAGCCCACTCCGGATTACCGGATCTTCCAGAACGCCTGGGTGCGCCAACGGCT CGGGTTCAACGACGGGATTCCGTTCGAGTACCGCGACATGGGCGTTCCAGAAGCCTTCCTGTCGCGCTCGGGCACGCGGC GCAGCACACGTTTCGACTTCGCCTACCTCGGAGACATGGACCGTCTGCGCGGCTTCGCGCCGCTGCTGCAAGCCCTGGCA CCGGCCGGACGCACGCTGCTGCTCATAGGGGAGCCGCCCGGCGACCTGCGGGCCTCACTGGGCCGCCTGCCCAACGTGAC GATGGCGGGACGCGTGCCGCAGGGCGATGTCCCGGCCCTGCTCGCGCAGGCGCGCTACGGCCTGAACCTGGTGCCGGTAC GCGCCCCCTACGACCGGCAGACCTCCACCAAGCTGCTCGAATACTGCGCAGTCGGGCTGCCCACCGTCTCCACCGACTAC CGCTGGGTGCGGGAATTCGAGCGCACGGCGGGCGCGCGGTTCATCTACCTTCCCGCCCACGCGACGGTGGCGCGCTATGC GGATCTGCTGGGAACCGGCCTGGACGAGCAGCCCCGCACCGTCCCGCCGATGCAAGCGCATGCCTGGAATGCGCTGCTGG CCCGCATGCACATATGGCGCCGATGGCAGGAGCGCGCATGA
Upstream 100 bases:
>100_bases CCGCGATCGTGCAGGCGGATTTGCAGCGCGTTCTGGAGCAGTACCGGCATGCGGACTTCCTGGCGGGGTGGCAGTCGGTG CTGCGGGAGGCGTCGGGACG
Downstream 100 bases:
>100_bases AACTGCTCGGCACCACGACGCATATCGCAGCCGCGAGCGCCGTCTCGCTGGCAGCCCAGGGGCTCTTCGGACTGCTCATG CTTCGGCTTTTCCAGCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARRHSGAFQVHEYASASVPPCAW LKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDMGVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALA PAGRTLLLIGEPPGDLRASLGRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWRRWQERA
Sequences:
>Translated_306_residues MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARRHSGAFQVHEYASASVPPCAW LKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDMGVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALA PAGRTLLLIGEPPGDLRASLGRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWRRWQERA >Mature_306_residues MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARRHSGAFQVHEYASASVPPCAW LKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDMGVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALA PAGRTLLLIGEPPGDLRASLGRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWRRWQERA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34365; Mature: 34365
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARR CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHH HSGAFQVHEYASASVPPCAWLKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDM CCCCEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCC GVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALAPAGRTLLLIGEPPGDLRASL CCCHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH GRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY CCCCCCEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHH RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWR HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RWQERA HHHHCC >Mature Secondary Structure MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARR CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHH HSGAFQVHEYASASVPPCAWLKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDM CCCCEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCC GVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALAPAGRTLLLIGEPPGDLRASL CCCHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH GRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY CCCCCCEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHH RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWR HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RWQERA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA