Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609893

Identifier: 120609893

GI number: 120609893

Start: 1328897

End: 1329817

Strand: Reverse

Name: 120609893

Synonym: Aave_1206

Alternate gene names: NA

Gene position: 1329817-1328897 (Counterclockwise)

Preceding gene: 120609894

Following gene: 120609892

Centisome position: 24.84

GC content: 68.95

Gene sequence:

>921_bases
ATGCTGATCCATTTCATCCATTCCGGGCAAGCCTACCTGCCGGAACTGGGAGCCTACTCCGCGTTCCTGCAGCAGTCCGG
ACACCAGGCCGTGCTCCACAGCCATCCCGGCACGGTACCCGGCGATGCCGAGGTACTGTGGTGGATCTGCGGGCTCGTGC
CCCCGGCCAGCGCCCGGCGCCATTCCGGGGCGTTCCAGGTGCACGAATACGCGTCGGCATCGGTGCCGCCCTGCGCCTGG
CTCAAGGACAGGATCAAATCCTGGCGCCAGCCCACTCCGGATTACCGGATCTTCCAGAACGCCTGGGTGCGCCAACGGCT
CGGGTTCAACGACGGGATTCCGTTCGAGTACCGCGACATGGGCGTTCCAGAAGCCTTCCTGTCGCGCTCGGGCACGCGGC
GCAGCACACGTTTCGACTTCGCCTACCTCGGAGACATGGACCGTCTGCGCGGCTTCGCGCCGCTGCTGCAAGCCCTGGCA
CCGGCCGGACGCACGCTGCTGCTCATAGGGGAGCCGCCCGGCGACCTGCGGGCCTCACTGGGCCGCCTGCCCAACGTGAC
GATGGCGGGACGCGTGCCGCAGGGCGATGTCCCGGCCCTGCTCGCGCAGGCGCGCTACGGCCTGAACCTGGTGCCGGTAC
GCGCCCCCTACGACCGGCAGACCTCCACCAAGCTGCTCGAATACTGCGCAGTCGGGCTGCCCACCGTCTCCACCGACTAC
CGCTGGGTGCGGGAATTCGAGCGCACGGCGGGCGCGCGGTTCATCTACCTTCCCGCCCACGCGACGGTGGCGCGCTATGC
GGATCTGCTGGGAACCGGCCTGGACGAGCAGCCCCGCACCGTCCCGCCGATGCAAGCGCATGCCTGGAATGCGCTGCTGG
CCCGCATGCACATATGGCGCCGATGGCAGGAGCGCGCATGA

Upstream 100 bases:

>100_bases
CCGCGATCGTGCAGGCGGATTTGCAGCGCGTTCTGGAGCAGTACCGGCATGCGGACTTCCTGGCGGGGTGGCAGTCGGTG
CTGCGGGAGGCGTCGGGACG

Downstream 100 bases:

>100_bases
AACTGCTCGGCACCACGACGCATATCGCAGCCGCGAGCGCCGTCTCGCTGGCAGCCCAGGGGCTCTTCGGACTGCTCATG
CTTCGGCTTTTCCAGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARRHSGAFQVHEYASASVPPCAW
LKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDMGVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALA
PAGRTLLLIGEPPGDLRASLGRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY
RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWRRWQERA

Sequences:

>Translated_306_residues
MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARRHSGAFQVHEYASASVPPCAW
LKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDMGVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALA
PAGRTLLLIGEPPGDLRASLGRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY
RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWRRWQERA
>Mature_306_residues
MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARRHSGAFQVHEYASASVPPCAW
LKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDMGVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALA
PAGRTLLLIGEPPGDLRASLGRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY
RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWRRWQERA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34365; Mature: 34365

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARR
CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHH
HSGAFQVHEYASASVPPCAWLKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDM
CCCCEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCC
GVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALAPAGRTLLLIGEPPGDLRASL
CCCHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
GRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY
CCCCCCEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHH
RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWR
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RWQERA
HHHHCC
>Mature Secondary Structure
MLIHFIHSGQAYLPELGAYSAFLQQSGHQAVLHSHPGTVPGDAEVLWWICGLVPPASARR
CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHH
HSGAFQVHEYASASVPPCAWLKDRIKSWRQPTPDYRIFQNAWVRQRLGFNDGIPFEYRDM
CCCCEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCC
GVPEAFLSRSGTRRSTRFDFAYLGDMDRLRGFAPLLQALAPAGRTLLLIGEPPGDLRASL
CCCHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
GRLPNVTMAGRVPQGDVPALLAQARYGLNLVPVRAPYDRQTSTKLLEYCAVGLPTVSTDY
CCCCCCEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHH
RWVREFERTAGARFIYLPAHATVARYADLLGTGLDEQPRTVPPMQAHAWNALLARMHIWR
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RWQERA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA