Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yceF [C]
Identifier: 120609867
GI number: 120609867
Start: 1301283
End: 1301882
Strand: Reverse
Name: yceF [C]
Synonym: Aave_1179
Alternate gene names: 120609867
Gene position: 1301882-1301283 (Counterclockwise)
Preceding gene: 120609890
Following gene: 120609866
Centisome position: 24.32
GC content: 70.17
Gene sequence:
>600_bases ATGTCTGCCCCCGCTTTCCCTCCCCGCCCGCTGGTACTGGGCTCCACCTCCCGCTATCGACGCGAACTGCTCGCCCGGCT GGGGGTGCCTTTCGACGTTTCCGCGCCCGATGTGGACGAAACCCCTCAGCCCGGCGAGTCGCCACGCGATCTGGCACTGC GGCTCGCGCAGGCCAAGGCGCGAGCCGTGGCGCGGCGCCACCCCGACGCGGTCGTCATCGGCTCCGACCAGGTGGCGGAC CTTTCCGGCACCCCGCTGGGCAAGCCGGGCACCCATGAACGGGCGGTGGCCCAGCTGCAGCGCATGCGCGGTCAAACCGT GGTGTTCCAGACGGCCGTGACCGTGACCTGCGCCGCCACGGGTTTCGAGGCCACCGATCTCGCGCCGGTGGAAGTGCGCT TCCGGGATCTTTCCGATGAAGAGATCGAGCGCTATCTGCGTGCCGAACAGCCCTACGACTGCGCGGGCAGCGCCAAGAGC GAAGGCCTGGGCATCAGCCTGCTGGACGCCATCGTGAGCGACGATCCCACGGCGCTGGTGGGCCTGCCGCTCATCCGCAC CTGCCGCATGCTGCGCAACGCGGGCCTGGTGCTGCCATGA
Upstream 100 bases:
>100_bases TGGCCGGACAGATGACCGCCCGCCTGCGCGAATGCCTTGACGTCGAGGCGCTGGGGAGAGAATTCCTTGGTCATGGCGGC AGTGTAAGAGAATCGCCGCC
Downstream 100 bases:
>100_bases CGGAGCACGCCCGCACTCCCCTGGCGCCCGATGCGGCCGGCACGCCCCGGCAGCGCGGCACGCTGTACCTCGTTCCGGCC CCTCTGGACTTCGGATGCGA
Product: maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSAPAFPPRPLVLGSTSRYRRELLARLGVPFDVSAPDVDETPQPGESPRDLALRLAQAKARAVARRHPDAVVIGSDQVAD LSGTPLGKPGTHERAVAQLQRMRGQTVVFQTAVTVTCAATGFEATDLAPVEVRFRDLSDEEIERYLRAEQPYDCAGSAKS EGLGISLLDAIVSDDPTALVGLPLIRTCRMLRNAGLVLP
Sequences:
>Translated_199_residues MSAPAFPPRPLVLGSTSRYRRELLARLGVPFDVSAPDVDETPQPGESPRDLALRLAQAKARAVARRHPDAVVIGSDQVAD LSGTPLGKPGTHERAVAQLQRMRGQTVVFQTAVTVTCAATGFEATDLAPVEVRFRDLSDEEIERYLRAEQPYDCAGSAKS EGLGISLLDAIVSDDPTALVGLPLIRTCRMLRNAGLVLP >Mature_198_residues SAPAFPPRPLVLGSTSRYRRELLARLGVPFDVSAPDVDETPQPGESPRDLALRLAQAKARAVARRHPDAVVIGSDQVADL SGTPLGKPGTHERAVAQLQRMRGQTVVFQTAVTVTCAATGFEATDLAPVEVRFRDLSDEEIERYLRAEQPYDCAGSAKSE GLGISLLDAIVSDDPTALVGLPLIRTCRMLRNAGLVLP
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=198, Percent_Identity=29.7979797979798, Blast_Score=71, Evalue=7e-13, Organism=Escherichia coli, GI87081830, Length=185, Percent_Identity=50.8108108108108, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI1789646, Length=184, Percent_Identity=38.5869565217391, Blast_Score=103, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21338; Mature: 21206
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPAFPPRPLVLGSTSRYRRELLARLGVPFDVSAPDVDETPQPGESPRDLALRLAQAKA CCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RAVARRHPDAVVIGSDQVADLSGTPLGKPGTHERAVAQLQRMRGQTVVFQTAVTVTCAAT HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHEEEEEECC GFEATDLAPVEVRFRDLSDEEIERYLRAEQPYDCAGSAKSEGLGISLLDAIVSDDPTALV CCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHH GLPLIRTCRMLRNAGLVLP HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SAPAFPPRPLVLGSTSRYRRELLARLGVPFDVSAPDVDETPQPGESPRDLALRLAQAKA CCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RAVARRHPDAVVIGSDQVADLSGTPLGKPGTHERAVAQLQRMRGQTVVFQTAVTVTCAAT HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHEEEEEECC GFEATDLAPVEVRFRDLSDEEIERYLRAEQPYDCAGSAKSEGLGISLLDAIVSDDPTALV CCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHH GLPLIRTCRMLRNAGLVLP HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA