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The map label for this gene is yggB [C]

Identifier: 120609890

GI number: 120609890

Start: 1324177

End: 1324914

Strand: Reverse

Name: yggB [C]

Synonym: Aave_1202

Alternate gene names: 120609890

Gene position: 1324914-1324177 (Counterclockwise)

Preceding gene: 120609891

Following gene: 120609867

Centisome position: 24.75

GC content: 66.4

Gene sequence:

>738_bases
ATGCTCCCTCCGTGGGTGAGCCATCCTTCTGTTCTTTCCCAAACCATTTCCCGGACGTTGACCGCTTTGCCCCCCTTGTC
CATGACCCGGCTCCGCACCTATTTTCCCGACTGGATGCAGGAATGGCTCGACATCATCGTGCCGGGCCTCCAGATCGTGC
TCATCCTGGTGCTCGCCGTGCTGCTGCAACGGACGCTGCGCCGCCTGCTCGAACGCGCGGGACGCCACTACCACTGGCCC
ATCGAGCTGATGGTGCCCATCAACGGGCTGGTGCGCTGGATCATCATGGGCAGCGCCGTACTGCTGGTGCTGGAGCGGCT
GGGGGTTTCGGCCACCGTGCTGTGGACGGCGTTCACGGGCTTCGCGGCAGTGGGCGCGGTCGCCTTCTTCGCGGCGTGGA
GCGTGCTCTCCAACCTGTTCTGCGCCCTGCTGATCTTCACCGCCGGTCCTTTCCGTCTGGGCGACTACATCGAGGTGCTG
GACACCGCGGAAAAGCCTGGAGCCAAAGGCCGCGTCGTGGACATCAACCTGCTCTACACCACGCTCGAAGACTTCGACGG
CACGCCGGATGCGCCCGTGCTGCTGCAGATCCCCAATGCACTGATCTTCCAGCGCGTGGTCCGGCGCTGGACCAGTGCGC
CGCCCCGGCCGGCGGATGCGGCGAAGACACAGCCCCCCGCGCCCGCGCATTCCACGGATCCGGTAGCGCCGGACACCCCC
TCGCTGCCAGCAGCCTGA

Upstream 100 bases:

>100_bases
GGATACCATCGAGCAGTTGCGCGGCTGACCCCCTGCGCCGCCACGCGCGCTTCCCGCCCCGGCAGCTGCGGGAACGGCCT
GCGGCCCCCCGCCGGCAGGG

Downstream 100 bases:

>100_bases
CAGAGAACCCGGACCGCCCTCCGCCACCTTCCATTCAGGATCTCAGCCGCCTTCGTGCGGCTTGTGTCCGCCCCCGTGGT
GCGGCGCCTGCGGCTGCGGC

Product: small-conductance mechanosensitive channel-like protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel Protein; Transmembrane Protein; Small-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLPPWVSHPSVLSQTISRTLTALPPLSMTRLRTYFPDWMQEWLDIIVPGLQIVLILVLAVLLQRTLRRLLERAGRHYHWP
IELMVPINGLVRWIIMGSAVLLVLERLGVSATVLWTAFTGFAAVGAVAFFAAWSVLSNLFCALLIFTAGPFRLGDYIEVL
DTAEKPGAKGRVVDINLLYTTLEDFDGTPDAPVLLQIPNALIFQRVVRRWTSAPPRPADAAKTQPPAPAHSTDPVAPDTP
SLPAA

Sequences:

>Translated_245_residues
MLPPWVSHPSVLSQTISRTLTALPPLSMTRLRTYFPDWMQEWLDIIVPGLQIVLILVLAVLLQRTLRRLLERAGRHYHWP
IELMVPINGLVRWIIMGSAVLLVLERLGVSATVLWTAFTGFAAVGAVAFFAAWSVLSNLFCALLIFTAGPFRLGDYIEVL
DTAEKPGAKGRVVDINLLYTTLEDFDGTPDAPVLLQIPNALIFQRVVRRWTSAPPRPADAAKTQPPAPAHSTDPVAPDTP
SLPAA
>Mature_245_residues
MLPPWVSHPSVLSQTISRTLTALPPLSMTRLRTYFPDWMQEWLDIIVPGLQIVLILVLAVLLQRTLRRLLERAGRHYHWP
IELMVPINGLVRWIIMGSAVLLVLERLGVSATVLWTAFTGFAAVGAVAFFAAWSVLSNLFCALLIFTAGPFRLGDYIEVL
DTAEKPGAKGRVVDINLLYTTLEDFDGTPDAPVLLQIPNALIFQRVVRRWTSAPPRPADAAKTQPPAPAHSTDPVAPDTP
SLPAA

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26985; Mature: 26985

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPPWVSHPSVLSQTISRTLTALPPLSMTRLRTYFPDWMQEWLDIIVPGLQIVLILVLAV
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQRTLRRLLERAGRHYHWPIELMVPINGLVRWIIMGSAVLLVLERLGVSATVLWTAFTG
HHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FAAVGAVAFFAAWSVLSNLFCALLIFTAGPFRLGDYIEVLDTAEKPGAKGRVVDINLLYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEHHHHH
TLEDFDGTPDAPVLLQIPNALIFQRVVRRWTSAPPRPADAAKTQPPAPAHSTDPVAPDTP
HHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SLPAA
CCCCC
>Mature Secondary Structure
MLPPWVSHPSVLSQTISRTLTALPPLSMTRLRTYFPDWMQEWLDIIVPGLQIVLILVLAV
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQRTLRRLLERAGRHYHWPIELMVPINGLVRWIIMGSAVLLVLERLGVSATVLWTAFTG
HHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FAAVGAVAFFAAWSVLSNLFCALLIFTAGPFRLGDYIEVLDTAEKPGAKGRVVDINLLYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEHHHHH
TLEDFDGTPDAPVLLQIPNALIFQRVVRRWTSAPPRPADAAKTQPPAPAHSTDPVAPDTP
HHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SLPAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA