Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is mviN [H]
Identifier: 120609856
GI number: 120609856
Start: 1288187
End: 1289824
Strand: Direct
Name: mviN [H]
Synonym: Aave_1168
Alternate gene names: 120609856
Gene position: 1288187-1289824 (Clockwise)
Preceding gene: 120609853
Following gene: 120609857
Centisome position: 24.07
GC content: 71.37
Gene sequence:
>1638_bases TTGCGCAAGGCGGTCTCCCCTGTCCATCATCCCCGGCCTGTGACGGCGGGCGCAGCGCATACACTCCTGCCCGTGTCCCT GTTCAAAGCCGCCTCCACCGTCTCCCTGCTGACCCTGGCCTCCCGCGTGTCGGGGCTGGCGCGCGATCTGCTGATGGCAT CGATGTTCGGGGCCAGCGCGCTCACCGACGCCTTCAACGTCGCCTTCCGCATTCCCAACCTGTTTCGCCGCCTCTTCGCC GAAGGGGCGTTCAGCCAAGCCTTCGTGCCCGTGCTGGCCACGCACCGGGCGCAGCAGGGCGAGGACGCCACGCGCGAACT GATTTCGAGCGTGGCGACCGCGCTCTTCTGGGTGCTGCTGGCCTCCTGCCTCGCGGGCGTGCTGGGCGCTCCGCTGCTGG TCTGGCTGCTGGCCAGCGGCCTGCGGCAGAACCCGCAGGGCTACGATGCGGCCGTGCTGATGACGCGCTGGATGTTCCCC TACATCGGTTTCATGTCGCTGGTGGCGCTGTCCGCCGGCGTGCTCAATACCTGGAAGCGCTTCGCCGTGCCGGCGGCCAC GCCGGTGCTGCTCAACCTCTGCATGATCCTGGCCGCGTGGCTGGGGGCGCCGCAACTGGCCGCCCGCGGCATCGAGCCCA TCTACGCCATGGCGGGCGGCGTGATGCTGGGCGGCATCGCGCAACTGGCCGTGCAACTGCCGGCGCTGCACCGGCTGCGG CTGCTGCCGCGCATCGGCATGTCTCCCGGCGCGGTCCGGGCCGCCTGGCAGGCGCCGGGGGTGCGGCGCATCCTCGTGCT CATGGGGCCGGCGCTGCTGGGCGTGGGCGTGGCGCAGATCTCCCTGATGATCAACACGCAGATCGCTTCCTACCTGGCCC CGGGCAGCGTCACCTGGCTGTTCTACGCGGACCGCCTGATGGAGTTCCCCACTTCGCTGCTGGGCGTCGCCCTGGGCGTG GTGCTCACGCCGCAGCTGGCGGCCGCCCGTGCCGCCGGCGACGCGCAGCGCTATTCCGCCATGCTGGACTGGGGCCTGCG CATCGTGGTGGTGCTGTCCGTGCCGTGCGCCGTGGCCCTGCTCACCTTCGCGCAGCCGCTGGTGGCCACGCTGTTCCACC ATGGTGCGCTGCACGACGGCGACGTGGGGCAGATCGCCCTGGCGCTCGCCGGCTACGGCGTGGGGTTGCTGGGGCTCGTC GCCATCAAGGTGCTCGCTCCCGGCTATTACGCCAGCCAGGACATCCGCACCCCCGTGCGCATCGCGGTGGTCGTGCTGTG CGTGACCCAGCTGCTCAACGCCGTCCTGGTGCCGACGCTGGAACATGCGGGCCTGGCGCTGTCCATCGGGCTGGGCGCGC TGGTGAACGCCCTGTGGCTGCTGGTGGGGCTGCTGCGCCGCGGCAGCTTCCAGCCGCAGCCCGGCTGGGGCCGGCTGCTG CTGCAGGTCGTGGCGGCCAGCGCACTGCTGGCGATTTTCCTGATCTGGGCCAGCCGGTACATCGACTGGATCGCGATGCG GGCGCACGAGGCGCAGCGGGTGGGATGGCTCGCGGTGTTCCTGGCGGGGGCGGCGGTGCTGTATTTCGGCGCGCTGTGGG CGGCCGGGATGAAACTGCGCCAGCTGCTGCGCCGCTGA
Upstream 100 bases:
>100_bases GCGAGGCGGGGGTTCTTTTTCTTGGGCTTGGCAGATGCCATGATGGATTCCTTAGGTGTCTGAGGATGATGTCAGCAAAG CCGGCGATTATAGCCCAGGC
Downstream 100 bases:
>100_bases AGCCCGACAGAAATTTTACCAATGCGTGGAATGCGTCTGCTTGACGCCCCCCGGCGCGCGCCCGTACAACCGCTGGCATG CCTCTGAGCTATTCCCTACC
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MRKAVSPVHHPRPVTAGAAHTLLPVSLFKAASTVSLLTLASRVSGLARDLLMASMFGASALTDAFNVAFRIPNLFRRLFA EGAFSQAFVPVLATHRAQQGEDATRELISSVATALFWVLLASCLAGVLGAPLLVWLLASGLRQNPQGYDAAVLMTRWMFP YIGFMSLVALSAGVLNTWKRFAVPAATPVLLNLCMILAAWLGAPQLAARGIEPIYAMAGGVMLGGIAQLAVQLPALHRLR LLPRIGMSPGAVRAAWQAPGVRRILVLMGPALLGVGVAQISLMINTQIASYLAPGSVTWLFYADRLMEFPTSLLGVALGV VLTPQLAAARAAGDAQRYSAMLDWGLRIVVVLSVPCAVALLTFAQPLVATLFHHGALHDGDVGQIALALAGYGVGLLGLV AIKVLAPGYYASQDIRTPVRIAVVVLCVTQLLNAVLVPTLEHAGLALSIGLGALVNALWLLVGLLRRGSFQPQPGWGRLL LQVVAASALLAIFLIWASRYIDWIAMRAHEAQRVGWLAVFLAGAAVLYFGALWAAGMKLRQLLRR
Sequences:
>Translated_545_residues MRKAVSPVHHPRPVTAGAAHTLLPVSLFKAASTVSLLTLASRVSGLARDLLMASMFGASALTDAFNVAFRIPNLFRRLFA EGAFSQAFVPVLATHRAQQGEDATRELISSVATALFWVLLASCLAGVLGAPLLVWLLASGLRQNPQGYDAAVLMTRWMFP YIGFMSLVALSAGVLNTWKRFAVPAATPVLLNLCMILAAWLGAPQLAARGIEPIYAMAGGVMLGGIAQLAVQLPALHRLR LLPRIGMSPGAVRAAWQAPGVRRILVLMGPALLGVGVAQISLMINTQIASYLAPGSVTWLFYADRLMEFPTSLLGVALGV VLTPQLAAARAAGDAQRYSAMLDWGLRIVVVLSVPCAVALLTFAQPLVATLFHHGALHDGDVGQIALALAGYGVGLLGLV AIKVLAPGYYASQDIRTPVRIAVVVLCVTQLLNAVLVPTLEHAGLALSIGLGALVNALWLLVGLLRRGSFQPQPGWGRLL LQVVAASALLAIFLIWASRYIDWIAMRAHEAQRVGWLAVFLAGAAVLYFGALWAAGMKLRQLLRR >Mature_545_residues MRKAVSPVHHPRPVTAGAAHTLLPVSLFKAASTVSLLTLASRVSGLARDLLMASMFGASALTDAFNVAFRIPNLFRRLFA EGAFSQAFVPVLATHRAQQGEDATRELISSVATALFWVLLASCLAGVLGAPLLVWLLASGLRQNPQGYDAAVLMTRWMFP YIGFMSLVALSAGVLNTWKRFAVPAATPVLLNLCMILAAWLGAPQLAARGIEPIYAMAGGVMLGGIAQLAVQLPALHRLR LLPRIGMSPGAVRAAWQAPGVRRILVLMGPALLGVGVAQISLMINTQIASYLAPGSVTWLFYADRLMEFPTSLLGVALGV VLTPQLAAARAAGDAQRYSAMLDWGLRIVVVLSVPCAVALLTFAQPLVATLFHHGALHDGDVGQIALALAGYGVGLLGLV AIKVLAPGYYASQDIRTPVRIAVVVLCVTQLLNAVLVPTLEHAGLALSIGLGALVNALWLLVGLLRRGSFQPQPGWGRLL LQVVAASALLAIFLIWASRYIDWIAMRAHEAQRVGWLAVFLAGAAVLYFGALWAAGMKLRQLLRR
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=531, Percent_Identity=44.4444444444444, Blast_Score=403, Evalue=1e-113,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 57836; Mature: 57836
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAVSPVHHPRPVTAGAAHTLLPVSLFKAASTVSLLTLASRVSGLARDLLMASMFGASA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTDAFNVAFRIPNLFRRLFAEGAFSQAFVPVLATHRAQQGEDATRELISSVATALFWVLL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ASCLAGVLGAPLLVWLLASGLRQNPQGYDAAVLMTRWMFPYIGFMSLVALSAGVLNTWKR HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVPAATPVLLNLCMILAAWLGAPQLAARGIEPIYAMAGGVMLGGIAQLAVQLPALHRLR HCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPRIGMSPGAVRAAWQAPGVRRILVLMGPALLGVGVAQISLMINTQIASYLAPGSVTWL HHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FYADRLMEFPTSLLGVALGVVLTPQLAAARAAGDAQRYSAMLDWGLRIVVVLSVPCAVAL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFAQPLVATLFHHGALHDGDVGQIALALAGYGVGLLGLVAIKVLAPGYYASQDIRTPVR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH IAVVVLCVTQLLNAVLVPTLEHAGLALSIGLGALVNALWLLVGLLRRGSFQPQPGWGRLL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LQVVAASALLAIFLIWASRYIDWIAMRAHEAQRVGWLAVFLAGAAVLYFGALWAAGMKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLRR HHHCC >Mature Secondary Structure MRKAVSPVHHPRPVTAGAAHTLLPVSLFKAASTVSLLTLASRVSGLARDLLMASMFGASA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTDAFNVAFRIPNLFRRLFAEGAFSQAFVPVLATHRAQQGEDATRELISSVATALFWVLL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ASCLAGVLGAPLLVWLLASGLRQNPQGYDAAVLMTRWMFPYIGFMSLVALSAGVLNTWKR HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVPAATPVLLNLCMILAAWLGAPQLAARGIEPIYAMAGGVMLGGIAQLAVQLPALHRLR HCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPRIGMSPGAVRAAWQAPGVRRILVLMGPALLGVGVAQISLMINTQIASYLAPGSVTWL HHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FYADRLMEFPTSLLGVALGVVLTPQLAAARAAGDAQRYSAMLDWGLRIVVVLSVPCAVAL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFAQPLVATLFHHGALHDGDVGQIALALAGYGVGLLGLVAIKVLAPGYYASQDIRTPVR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH IAVVVLCVTQLLNAVLVPTLEHAGLALSIGLGALVNALWLLVGLLRRGSFQPQPGWGRLL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LQVVAASALLAIFLIWASRYIDWIAMRAHEAQRVGWLAVFLAGAAVLYFGALWAAGMKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLRR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]